Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01298 ATGCTTTCACTACCACGAACACTGTCACGCAAATTATCATCAAAGAGAACAACAAAAACAACAACTCAAAGATGCAAAGGAGAAAGAGAAATCGAAATCAGTACAGTGAAGATTAAAGATATCATACGGTGGAAATCGTTTCGAGATTTACAACCTTCTGTTCCGTTACCGCCGCTTGATTTTAACTGTTATGTAACGGAGTCGTCGACGGTTACGACTGCGACGACGACTTGTTCTAGTAGTGACGGTGGTTCTAGTTGGAGTGACGGTGATTTTTTTAGTGATTTGTGGGAAGCGCAAAACGACGGCGTTGGAGAGAGTAAAAAAAGTTCGTTTTCATCTTTTTTTGTCGGCAAGGATTCGGTGGCGCCATCGTTCGTTGGGACAAAGGAAGATTTGACTTGCCAAGATGAACAACACAGTCCAGTTTCAGTTCTTCATGTTGCAGAAAATGAATTTTCAATCTTTGATCAAAGCTTTGCCAATATTGAAAGGAGAAAACAAAAATTCAAACAAACTGCTGATAAATTTGAGAGTCATGTAAAATTTGACTTTGCAAGCTTAGATGGATGTCTCTCATTGGATGAGAACTCATATTATGATGAAGAATATAAAGATGACAATAAGGAGGAGGTGGACCAAAAGGTTGAAGAACTAGATTGGGTTGAGGAAAAGGCAAATCAATTGCTACATTGTGTTAAAGCAACATGTTCATCAGTGGAAAAATGTGATGACAATTTTGGTATAGTTCTCTTGGATTTTTTCAAGGAAGAACTAAGTGGTAATAGAAACCAAAAGAGGAACAGTGAGGAGTTTGAGATAATGAAAATAGCTGAGGATTGGATCAATGAATCATTTGAAAATGCTTATGACATTGTGCATGTTAATAAAGATGCTTATATCAAGGAAATGGATAGAAGAGATGGGTGGAATAGGTTAGAGGAGGAGCAAGAAGAAATGGTTTTTGAGATTGAGGCAGCTATATTGCGTAGTTTGGTTGATGAGATTTTTAACATAGATGGTTAA 1026 0.3743 MLSLPRTLSRKLSSKRTTKTTTQRCKGEREIEISTVKIKDIIRWKSFRDLQPSVPLPPLDFNCYVTESSTVTTATTTCSSSDGGSSWSDGDFFSDLWEAQNDGVGESKKSSFSSFFVGKDSVAPSFVGTKEDLTCQDEQHSPVSVLHVAENEFSIFDQSFANIERRKQKFKQTADKFESHVKFDFASLDGCLSLDENSYYDEEYKDDNKEEVDQKVEELDWVEEKANQLLHCVKATCSSVEKCDDNFGIVLLDFFKEELSGNRNQKRNSEEFEIMKIAEDWINESFENAYDIVHVNKDAYIKEMDRRDGWNRLEEEQEEMVFEIEAAILRSLVDEIFNIDG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01298 341 PANTHER OS04G0572500 PROTEIN 4 336 - -
Trre16g01298 341 MobiDBLite consensus disorder prediction 1 25 - -
Trre16g01298 341 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01298 Trre-Chr16 10127491 10130686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01298 4 337 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 30.601 9.02e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01298 - - psat:127075862 424.091