Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01297 ATGGAGGTGGTGCAACTAAGAAGATTCAACTCAATGGAAAGAAGGCCAAGAATGTTGAAAGATTTTCTAAGCGAGAATCTAAGTTCATGTTCTTCAAGCGGATTCAAATCACTTCCGAGAAGAACAAACACCATTCAAATTCATCACACACATTCATCATCATCAAGATTTCAAACACTGATAAAAACCATAAAAAACAACGTATCATTCTTCAAAATTACAAAATCACCCTCCACCATGCTTTCACTACCACGAACACTGTCACGCAAATTATCATCAAAGAGAACAACAAAAACAACAACTCAAAGATGCAAAGGAGAAAGAGAAATCGAAATCAGTACAGTGAAGATTAAAGATATCATACGGTGGAAATCGTTTCGAGATTTACAACCTTCTGTTCCGTTACCGCCGCTTGATTTTAACTGTTATGTAACGGAGTCGTCGACGGTTACGACTGCGACGACGACTTGTTCTAGTAGTGACGGTGGTTCTAGTTGGAGTGACGGTGATTTTTTTAGTGATTTGTGGGAAGCGCAAAACGACGGCGTTGGAGAGAGTAAAAAAAGTTCGTTTTCATCTTTTTTTGTCGGCAAGGATTCGGTGGCGCCATCGTTCGTTGGGACAAAGGAAGATTTGACTTGCCAAGATGAACAACACAGTCCAGTTTCAGTTCTTCATGTTGCAGAAAATGAATTTTCAATCTTTGATCAAAGCTTTGCCAATATTGAAAGGAGAAAACAAAAATTCAAACAAACTGCTGATAAATTTGAGAGTCATGTAAAATTTGACTTTGCAAGCTTAGATGGATGTCTCTCATTGGATGAGAACTCATATTATGATGAAGAATATAAAGATGACAATAAGGAGGAGGTGGACCAAAAGGTTGAAGAACTAGATTGGGTTGAGGAAAAGGCAAATCAATTGCTACATTGTGTTAAAGCAACATGTTCATCAGTGGAAAAATGTGATGACAATTTTGGTATAGTTCTCTTGGATTTTTTCAAGGAAGAACTAAGTGGTAATAGAAACCAAAAGAGGAACAGTGAGGAGTTTGAGATAATGAAAATAGCTGAGGATTGGATCAATGAATCATTTGAAAATGCTTATGACATTGTGCATGTTAATAAAGATGCTTATATCAAGGAAATGGATAGAAGAGATGGGTGGAATAGGTTAGAGGAGGAGCAAGAAGAAATGGTTTTTGAGATTGAGGCAGCTATATTGCGTAGTTTGGTTGATGAGATTTTTAACATAGATGGTTAA 1263 0.3705 MEVVQLRRFNSMERRPRMLKDFLSENLSSCSSSGFKSLPRRTNTIQIHHTHSSSSRFQTLIKTIKNNVSFFKITKSPSTMLSLPRTLSRKLSSKRTTKTTTQRCKGEREIEISTVKIKDIIRWKSFRDLQPSVPLPPLDFNCYVTESSTVTTATTTCSSSDGGSSWSDGDFFSDLWEAQNDGVGESKKSSFSSFFVGKDSVAPSFVGTKEDLTCQDEQHSPVSVLHVAENEFSIFDQSFANIERRKQKFKQTADKFESHVKFDFASLDGCLSLDENSYYDEEYKDDNKEEVDQKVEELDWVEEKANQLLHCVKATCSSVEKCDDNFGIVLLDFFKEELSGNRNQKRNSEEFEIMKIAEDWINESFENAYDIVHVNKDAYIKEMDRRDGWNRLEEEQEEMVFEIEAAILRSLVDEIFNIDG 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01297 420 PANTHER OS04G0572500 PROTEIN 6 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01297 Trre-Chr16 10127254 10130686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01297 12 416 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 32.574 2.60e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01297 - - psat:127075862 518.85