Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01274 ATGGAGGAGGACATGCATGGAAAGGCAATGGAAGAGATTATGAGAGGGTGTGAGTCTGCTCACCAGCTTAGGCAACTACTACTCAATAATCATGAGTTGACAAAAACAAAAACAACCTCAATATTTGTTGAACATGTTGTCAACAACATCCTCAATTCCTTTAACAATGTCCTTTTCCTATTGGACAAAGACAAACATAACAAAATAGTACAAAAGGATCACTTTTCATCCATTGCTCCAATAATTAGATCTGATGACTTGGAACAAAGTTGCAATCTGATGAATACTTCTACTGCCGTCAGAGGATCATATTACAAAAGAAGAAACACTACACAAACATGGGAGGAGGTGACAAAGATTCCAACAGATGATGATGGGCATCGATGGAGAAAGTATGGCCAGAAAAAGATCAACAATTCTCAATACTCAAGGAACTACTATAGGTGTACTCACAAGTATGATCAAAGATGCCTAGCAACAAAACAAGTGCATAGAATTCAACAAAAACCTCCCTTATATAAGACCACATATTATGGCCACCACACTTGTGGAAAATACTTGTCCAACCCTCACATCATACTTGATCCTAATAATAATGACACTAATTCCTCCATATTGCTTAGCTTTAACAATACATTCCCAAATCCAACAAAACAAGAATGTCCATTTTTATCATCATCATCATTATTATCAACATCACCATCTATTTCTTCATCACCTAATTCATTTGAGTATAAGGAGGATGTTCCCTCATCTTCCTTAGATGATAACCTACTTTCCCATGATCCCACTTTAGATAATTCTATTTCTACAAGGCATGTTAGTACTATATCATCAACACTTGATGAATTTGATCACAAGGATATGATGTATGGTTTCTCCAATGATTTTGTTGAGTTTGATGATGATTTCTTTCACCCTTTTAATGGGTTTTGA 936 0.3568 MEEDMHGKAMEEIMRGCESAHQLRQLLLNNHELTKTKTTSIFVEHVVNNILNSFNNVLFLLDKDKHNKIVQKDHFSSIAPIIRSDDLEQSCNLMNTSTAVRGSYYKRRNTTQTWEEVTKIPTDDDGHRWRKYGQKKINNSQYSRNYYRCTHKYDQRCLATKQVHRIQQKPPLYKTTYYGHHTCGKYLSNPHIILDPNNNDTNSSILLSFNNTFPNPTKQECPFLSSSSLLSTSPSISSSPNSFEYKEDVPSSSLDDNLLSHDPTLDNSISTRHVSTISSTLDEFDHKDMMYGFSNDFVEFDDDFFHPFNGF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01274 311 SUPERFAMILY WRKY DNA-binding domain 118 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre16g01274 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 205 IPR044810 GO:0003700
Trre16g01274 311 Gene3D WRKY domain 107 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre16g01274 311 MobiDBLite consensus disorder prediction 234 257 - -
Trre16g01274 311 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g01274 311 ProSiteProfiles WRKY domain profile. 118 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g01274 311 Pfam WRKY DNA -binding domain 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01274 Trre-Chr16 10022763 10024449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01274 1 216 WRKY Transcription Factor Family AT1G66550 31.963 5.67e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre16g01274 WRKY 4.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01274 - - tpra:123896186 376.711