Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01209 ATGGATATAGCTTTTAGCTTACCACAATCAAAAGTAGCTTTGACTGGTTTGGATTCTGGTGTTTTGTTTGGAGGGAGAAGCTTTGGTTGTGGTTTTGTTAGTAATTCAAGGAATGTTTTGAAAGGTTATTGTGGAAGAGAGTTCCGAGTTTCGAATTTGAAGTTGAATTTGTTGTGTAGGAATAGGAGTAGTAAACTTTTTAGGGGAAATAGGGGGATTTGGTTGAAGTGTCAGGGAAATGATTCGTTTGATTATGATAATGGAAATGGTAGGAGTGTTGATAATTTCAAAGGTTTGAATGAGGATTCTGATTTGGAGTCTATTTCCGGTGCGGAATTGGGTGAACCCGTTGGAGAAGTTGGGGGTCAAGTAGAAGTAGAGGTACAAAGTGTGGATGAATTGAAAGAATTGTTGCAAAAGGCTTTGAAAGAGTTAGAAGCTGCTAGAGTGAATAGTATTGTGTTTGAGGAAAAGGTTAAGAAGATATCGGAGACTGCGATATCTTTGCAGGATGAAGCAGCAAGAGCTTGGAATGATGTTAATTCTACACTTGATGTTATTCAGGAAATTGTGTGTCAAGAATTTATTGCTAAAGAAGCTGTTCAAAATGCAACAATGGCTCTTTCTTTAGCCGAGGCAAGGCTTCAAGTAGCTGTTGAGTCTTTGGAGGTTGCAAATGAAGATTATACTGTGCGAGGTTCAAATGAGAGTGATGGTGGTAAAGGTATAGGGCAAGAGGAGAAAGAACGTGTGGTTGCTCTGGAAGATATCAAGGAATGTCAGACAAATTTAGCGTGTTGTGAGGCTGAGTTGAAGCGATTGCAAAGTAAAAAAGAGGAGTTGCAAAATGAAGTGAACAAGTTGCATGGCTTTGCTGAAAAAGCACAGTTGATTGCAATTAAAGCAGAGGAGGATGTCACAGACATAATGCATTTGGCCGAGCAAGCTGTTGCTTTTGAACTAGAGGCTGCAAAACGTGTTAACGATGCAGAGATTGCATTTCAGAGAGCAAACAAGTCTGTCACTGGCATTAATGACGATACCACTGACACTCTACAAGTACAAGATGTCGTGGCCCTCCCCAAGGAGGAGAAATTGGTTCAACAATTTTCTGGTGATGCTGCTGTTAAAGGAGAGCCCGAGTTATCAAGTAATGACGAGTCTTTGCTTGCTGCAGGATCACTAGAGACACAGTCTAATAAAACCAGCCAAATCTCGGAAGACATAACTCAATCTGATTATCTGAGTGATCATGATAATGGACAGTTAAGCTTAGACTCTTCTAAAGAATCTGAACTTGAAGTAGACAAGTCAAAAAATGTAGTTCAAACAAAAAAACAGGAAACACAGAAAGATTTGACTAGAGATAATGCACCATCTGCTCCCAAGACATCAATGAAGAAATCTTCCCGGTTTTTTCCCGCGTCATTTTTCTCTTCTAGCACAGATGAGATTGATTACTCACTAGCATCAGTTTTCAATGGTCTTGTGGAATCTGCACAGAATCAATTACCGAAGCTGATTGTTGGGTTATTGTTAATTGGAGCAGGGGTCACCTTCTATTCCAACCGAGCAGAGAGGAGTTCTCAGCTGCTTCAGCAGCCTGAAGTCATTACAACCACTGTTGAAGAAGTTTCCTCTAGTGCAAGGCCTTTAGTTAGACAACTTAAGGAACTACCCAATAGAATTAAGAAAGTTATTGCATCGTTACCTGATCAAGAGTTGAATGACGAGGAAGCCTCCCTCCTTGACATGCTCTGGCTATTACTTGCAAGTGTTATTTTTGTCCCACTATTTCAAAAAATTCCTGGAGGCAGTCCTGTTCTTGGTTACTTGGCTGCTGGAATCTTGATTGGGCCTTATGGACTCTCCATCATTCGCAATGTTCACGAGACAAAATCAATAGCCGAATTTGGAGTTGTTTTCCTATTATTTAATATTGGTCTGGAGCTCTCGGTGGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGTTGACTGCCGCAGTTATCGGGTTGGTGGCTCATTATATTTGTGGCCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCGACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAGGTGAGAGCACATCGCGACATGGGCGAGCTACATTTTCCGTGTTGCTTTTTCAGGATTTGGCCGTTGTTGTCTTGTTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCCATTGCTGAAGCTCTTGGTCTTGCTGCTGTTAAGGCTGCAGTTTCCATCACTGCTATAATTGCAGGTGGACGATTGCTCCTTCGACCTATATATAGGCAGATTGCAGACAATCAGAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTGTTCTTGGGACCAGCCTTCTCACTGCCAGGGCAGGCCTGTCCATGGCCTTGGGAGCGTTTTTGGCTGGTTTACTACTGGCGGAAACTGAATTTTCCTTACAGGTCGAATCTGATATTGCTCCATACCGTGGCCTTCTATTGGGCCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTCTTTCAAACTTTCCAGTCATCATAGGGACACTGGGACTCTTGATATGTGGCAAGATACTCTTGGTTGCTTTGATTGGCAAATTTTTTGGTATTTCAATCATATCTGCTATCAGAGTTGGGCTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTCCTTGTTGTGGGAATTTCAATGGCGCTTACGCCATGGTTGGGTGAAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAACATGATGTTCGTAGCTTATTACCTGTAGAAAGTGAGACAGATGATCTGCATGATCATATCATTATTTGTGGATTTGGGCGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGGCTTATTCCTTTTGTTGCACTAGATGTGCGAAGTGATAGAGTGGCAGTTGGGCGCTCCTTGGATCTCCCTGTGTACTTCGGTGACGCTGGTAGTCGAGAGGTCCTACATAAAGTTGGGGCTGGAAGGGCAAGTGCTGCAGCAATAACTCTAGATTCACCTGGTGCAAACTATAGAACGGTTTGGGCTCTGAGCAAACACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATGTTACTCACGGATTGAATTTAGAAAAAGCTGGAGCTACTGCCGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCAGCAGTGCTTTCTGAGGTTAAACTTCCTGCATCAGAGATTGCGGCAACAATTAATGAATTCAGATCCCGTCATCTGGCCGAGCTTACAGAACTATCTGAAACAAGTGGAAGTTCTCTTGGATATGGATATAGCAGAATGATGAGCAAACCCAAATCCCAATCTCCCGATACAATTGATGACGCCCAAGTCCCTGAAGGGTCGACATGA 3555 0.4273 MDIAFSLPQSKVALTGLDSGVLFGGRSFGCGFVSNSRNVLKGYCGREFRVSNLKLNLLCRNRSSKLFRGNRGIWLKCQGNDSFDYDNGNGRSVDNFKGLNEDSDLESISGAELGEPVGEVGGQVEVEVQSVDELKELLQKALKELEAARVNSIVFEEKVKKISETAISLQDEAARAWNDVNSTLDVIQEIVCQEFIAKEAVQNATMALSLAEARLQVAVESLEVANEDYTVRGSNESDGGKGIGQEEKERVVALEDIKECQTNLACCEAELKRLQSKKEELQNEVNKLHGFAEKAQLIAIKAEEDVTDIMHLAEQAVAFELEAAKRVNDAEIAFQRANKSVTGINDDTTDTLQVQDVVALPKEEKLVQQFSGDAAVKGEPELSSNDESLLAAGSLETQSNKTSQISEDITQSDYLSDHDNGQLSLDSSKESELEVDKSKNVVQTKKQETQKDLTRDNAPSAPKTSMKKSSRFFPASFFSSSTDEIDYSLASVFNGLVESAQNQLPKLIVGLLLIGAGVTFYSNRAERSSQLLQQPEVITTTVEEVSSSARPLVRQLKELPNRIKKVIASLPDQELNDEEASLLDMLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHETKSIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLLTAAVIGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVSITAIIAGGRLLLRPIYRQIADNQNAEIFSANTLFVVLGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIIGTLGLLICGKILLVALIGKFFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLGEGGQLIASRFEQHDVRSLLPVESETDDLHDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRSLDLPVYFGDAGSREVLHKVGAGRASAAAITLDSPGANYRTVWALSKHFPNVKTFVRAHDVTHGLNLEKAGATAVVPETLEPSLQLAAAVLSEVKLPASEIAATINEFRSRHLAELTELSETSGSSLGYGYSRMMSKPKSQSPDTIDDAQVPEGST 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01209 1184 Gene3D - 578 963 IPR038770 -
Trre16g01209 1184 Coils Coil 257 291 - -
Trre16g01209 1184 FunFam K(+) efflux antiporter 2 chloroplastic 986 1150 - -
Trre16g01209 1184 Coils Coil 124 151 - -
Trre16g01209 1184 Pfam Sodium/hydrogen exchanger family 588 958 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre16g01209 1184 Pfam TrkA-N domain 991 1104 IPR003148 GO:0006813
Trre16g01209 1184 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 166 1173 - -
Trre16g01209 1184 ProSiteProfiles RCK N-terminal domain profile. 990 1112 IPR003148 GO:0006813
Trre16g01209 1184 FunFam K(+) efflux antiporter 2 chloroplastic 578 964 - -
Trre16g01209 1184 Gene3D - 987 1150 - -
Trre16g01209 1184 MobiDBLite consensus disorder prediction 423 453 - -
Trre16g01209 1184 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 987 1128 IPR036291 -
Trre16g01209 1184 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 589 869 IPR004771 GO:0006812|GO:0008324|GO:0016020
Trre16g01209 1184 MobiDBLite consensus disorder prediction 1158 1184 - -
Trre16g01209 1184 MobiDBLite consensus disorder prediction 411 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01209 Trre-Chr16 9573764 9584250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01209 72 1183 Inorganic Solute Cotransporters AT4G00630 70.489 0.0 1414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01209 K03455 - gmx:100791174 1646.33