Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01169 ATGGAAAAGAGTGCTCGTGATTGTGATTTCGTTGCTGCTTCTGGGGAAGATTTGCTTGAAGAGGACGACATCCATGTTGATGAGGGAAAAAGCAGAAAACCCTCATCTTTGGAGAAACATGTGCTGCTTTTTCCACCCACATCTGATTCAAATTATACCTTAGGGGATCCTGAGGAGTTTAATGTAGGTCGATTTTATGAAATTGACCATTCCAACCTTCCACCTAATTGTCCTGTTCAAGTAAAATATGTGAACATTGTAATGGTCAGTGGCACAGGGGAGGGACAAGTATATCTGAGGTATCCAAGCCTCGACTCTCTTTGCACGCACTTCAACGACCAATGCTTTTGGAAGAAAATCCCCGAACTTGATGAGAAGTACGTGATGGGAGTCGAATTCGCCATCAAAACACTTTGCAGGAGCATCACAACTGAGGAATTTGCTCAAAAAAGAAACTCATGGAGCTTCTGGGTCTCTGCTACTAAAGAAAACTTTCAAAACCATAACAGTCCAGTTCCAGTCATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCTGAACTCAAGTTCTCGGCTGGTATGATGCAGTGGGGCCAACGCCGGCAAGTTCGGTACTTGGGCCGTTGTGAGGAGCAAAAGGTTGAATCTTTACATAAACTTCATAAAGAAAAAGGAGTCATTTTTGAACCCAGTGAAGGGACTAATAAGAAGAAAAGAAAGAATGTTGAAGAAGAAATGGTGGCTGTAAAGGTGGCTCCTTTTGGGGTACCGAGGATCACTCGTGAATGCAGGAAAAACCAAGGCGCGGGTAGTAGCAGCGGGGCTAAAAAGTCTATGAAAGCAGTAAACGACACCGACAAGCAGCAACTTGTCGTTTATGGCAAAAAGAAGCGAAAAATATCTATTGACAGATGGTCTGCTGAGAGGTATAAGCTGGCAGAGGAGAGCATATTGATGGTTATGAAGGAAAAAGAAGCTGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATTAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGTGTTGAAAGATTTAGAAGGCGACACAATGCGGAAGGCTTAATGGAGTACTGGTTAGAGAGTGCTGATCTTGCTGATATCAGAAAGGAAATGGGTGTCCAAGACCCTTACTGGAGTCCTCCCCCTGGATGGAAGCCTGGCGACAGCATTTCACCAGATCATGTTACTAGTAATGAAATCAGAAAGATAAAGGAGGAAATAAATAAGCTGAAACGAGATATGCAGGAGCTTGCATCAAAGAAAGAAAAGGAAGCATTGGTCACTGTAGCTACTCCTAGTTCTTGTTTGTCAAGTTTGAATTGTAAGGACTATGGTTCTCAGGTTTCTAAGCAGGATATTTATTTGGAGCTGGTTCATAAAAAGGCTATAATTGAAGAACAACTAAGAGAAATTTCTCTGGCTTTGATTGGCATGGAGGATCAACTGGGAAGGCTGAAAGAACCAATAATGTCAGAATCATTAACACCACAAAAGTTATTGCTAGGACCAGCATCAATGACAGAAAACATTCTGGAGAAGACAGGGGAGAAGGAAAAATGGAATAATGACAAAGAAACAAAATCAGCAGACACACAAATGGTAGGAAGTACAGCAGTAGAGGACAGGGCAGCAAAGATAAGAAGACTGAAAAGTGGTTTCCAAATTTGCAAACCAAGAGGGACCTTTAAGTGGCCAAATATGAGTATGTCTCCACATGTTGTGGCCAACCTTGATGAACACACTATGGTCCTAACCCCAGGCTCAGCTTCCTCTACTACCACCTCACCTCCCAAGCTTATCTGCAATTCTCAGACTCCTAACTTGCCATTATCCCTACCTTGCCCTTCATCTCCTGTTAAGCCACTGGCAGAGAGGCGCGCTGTGAGCACAACTACTTTGGCACATGTCACTGGACCATTTTCCCCTCCATTAGAGACCCCAAAATCCACAATCAATATTACTACCATCACCAAGAGCAGCTCTTCTATTAACCTTAATGAGACTCCTCTGGACTAG 2106 0.4321 MEKSARDCDFVAASGEDLLEEDDIHVDEGKSRKPSSLEKHVLLFPPTSDSNYTLGDPEEFNVGRFYEIDHSNLPPNCPVQVKYVNIVMVSGTGEGQVYLRYPSLDSLCTHFNDQCFWKKIPELDEKYVMGVEFAIKTLCRSITTEEFAQKRNSWSFWVSATKENFQNHNSPVPVINDAATSLVSKQGSCWSELKFSAGMMQWGQRRQVRYLGRCEEQKVESLHKLHKEKGVIFEPSEGTNKKKRKNVEEEMVAVKVAPFGVPRITRECRKNQGAGSSSGAKKSMKAVNDTDKQQLVVYGKKKRKISIDRWSAERYKLAEESILMVMKEKEAVYGNPIMRPDLRLEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLADIRKEMGVQDPYWSPPPGWKPGDSISPDHVTSNEIRKIKEEINKLKRDMQELASKKEKEALVTVATPSSCLSSLNCKDYGSQVSKQDIYLELVHKKAIIEEQLREISLALIGMEDQLGRLKEPIMSESLTPQKLLLGPASMTENILEKTGEKEKWNNDKETKSADTQMVGSTAVEDRAAKIRRLKSGFQICKPRGTFKWPNMSMSPHVVANLDEHTMVLTPGSASSTTTSPPKLICNSQTPNLPLSLPCPSSPVKPLAERRAVSTTTLAHVTGPFSPPLETPKSTINITTITKSSSSINLNETPLD 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01169 701 PANTHER PROTEIN DYAD 58 690 IPR044221 GO:0007131|GO:0051177|GO:0051321
Trre16g01169 701 Coils Coil 430 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01169 Trre-Chr16 9267501 9271635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01169 301 390 PHD Transcription Factor Family AT5G22260 36.170 2.11e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01169 - - mtr:25502410 838.565