Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01168 ATGATTATGGAAAAGAGTGCTCGTGATTGTGATTTCGTTGCTGCTTCTGGGGAAGATTTGCTTGAAGAGGACGACATCCATGTTGATGAGGGAAAAAGCAGAAAACCCTCATCTTTGGAGAAACATGTGCTGCTTTTTCCACCCACATCTGATTCAAATTATACCTTAGGGGATCCTGAGGAGTTTAATGTAGGTCGATTTTATGAAATTGACCATTCCAACCTTCCACCTAATTGTCCTGTTCAAGTAAAATATGTGAACATTGTAATGGTCAGTGGCACAGGGGAGGGACAAGTATATCTGAGGTATCCAAGCCTCGACTCTCTTTGCACGCACTTCAACGACCAATGCTTTTGGAAGAAAATCCCCGAACTTGATGAGAAGTACGTGATGGGAGTCGAATTCGCCATCAAAACACTTTGCAGGAGCATCACAACTGAGGAATTTGCTCAAAAAAGAAACTCATGGAGCTTCTGGGTCTCTGCTACTAAAGAAAACTTTCAAAACCATAACAGTCCAGTTCCAGTCATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCTGAACTCAAGTTCTCGGCTGGTATGATGCAGTGGGGCCAACGCCGGCAAGTTCGGTACTTGGGCCGTTGTGAGGAGCAAAAGGTTGAATCTTTACATAAACTTCATAAAGAAAAAGGAGTCATTTTTGAACCCAGTGAAGGGACTAATAAGAAGAAAAGAAAGAATGTTGAAGAAGAAATGGTGGCTGTAAAGGTGGCTCCTTTTGGGGTACCGAGGATCACTCGTGAATGCAGGAAAAACCAAGGCGCGGGTAGTAGCAGCGGGGCTAAAAAGTCTATGAAAGCAGTAAACGACACCGACAAGCAGCAACTTGTCGTTTATGGCAAAAAGAAGCGAAAAATATCTATTGACAGATGGTCTGCTGAGAGGTATAAGCTGGCAGAGGAGAGCATATTGATGGTTATGAAGGAAAAAGAAGCTGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATTAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGTGTTGAAAGATTTAGAAGGCGACACAATGCGGAAGGCTTAATGGAGTACTGGTTAGAGAGTGCTGATCTTGCTGATATCAGAAAGGAAATGGGTGTCCAAGACCCTTACTGGAGTCCTCCCCCTGGATGGAAGCCTGGCGACAGCATTTCACCAGATCATGTTACTAGTAATGAAATCAGAAAGATAAAGGAGGAAATAAATAAGCTGAAACGAGATATGCAGGAGCTTGCATCAAAGAAAGAAAAGGAAGCATTGGTCACTGTAGCTACTCCTAGTTCTTGTTTGTCAAGTTTGAATTGTAAGGACTATGGTTCTCAGGTTTCTAAGCAGGATATTTATTTGGAGCTGGTTCATAAAAAGGCTATAATTGAAGAACAACTAAGAGAAATTTCTCTGGCTTTGATTGGCATGGAGGATCAACTGGGAAGGCTGAAAGAACCAATAATGTCAGAATCATTAACACCACAAAAGTTATTGCTAGGACCAGCATCAATGACAGAAAACATTCTGGAGAAGACAGGGGAGAAGGAAAAATGGAATAATGACAAAGAAACAAAATCAGCAGACACACAAATGGTAGGAAGTACAGCAGTAGAGGACAGGGCAGCAAAGATAAGAAGACTGAAAAGTGGTTTCCAAATTTGCAAACCAAGAGGGACCTTTAAGTGGCCAAATATGAGTATGTCTCCACATGTTGTGGCCAACCTTGATGAACACACTATGGTCCTAACCCCAGGCTCAGCTTCCTCTACTACCACCTCACCTCCCAAGCTTATCTGCAATTCTCAGACTCCTAACTTGCCATTATCCCTACCTTGCCCTTCATCTCCTGTTAAGCCACTGGCAGAGAGGCGCGCTGTGAGCACAACTACTTTGGCACATGTCACTGGACCATTTTCCCCTCCATTAGAGACCCCAAAATCCACAATCAATATTACTACCATCACCAAGAGCAGCTCTTCTATTAACCTTAATGAGACTCCTCTGGACTAG 2112 0.4313 MIMEKSARDCDFVAASGEDLLEEDDIHVDEGKSRKPSSLEKHVLLFPPTSDSNYTLGDPEEFNVGRFYEIDHSNLPPNCPVQVKYVNIVMVSGTGEGQVYLRYPSLDSLCTHFNDQCFWKKIPELDEKYVMGVEFAIKTLCRSITTEEFAQKRNSWSFWVSATKENFQNHNSPVPVINDAATSLVSKQGSCWSELKFSAGMMQWGQRRQVRYLGRCEEQKVESLHKLHKEKGVIFEPSEGTNKKKRKNVEEEMVAVKVAPFGVPRITRECRKNQGAGSSSGAKKSMKAVNDTDKQQLVVYGKKKRKISIDRWSAERYKLAEESILMVMKEKEAVYGNPIMRPDLRLEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLADIRKEMGVQDPYWSPPPGWKPGDSISPDHVTSNEIRKIKEEINKLKRDMQELASKKEKEALVTVATPSSCLSSLNCKDYGSQVSKQDIYLELVHKKAIIEEQLREISLALIGMEDQLGRLKEPIMSESLTPQKLLLGPASMTENILEKTGEKEKWNNDKETKSADTQMVGSTAVEDRAAKIRRLKSGFQICKPRGTFKWPNMSMSPHVVANLDEHTMVLTPGSASSTTTSPPKLICNSQTPNLPLSLPCPSSPVKPLAERRAVSTTTLAHVTGPFSPPLETPKSTINITTITKSSSSINLNETPLD 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01168 703 Coils Coil 432 459 - -
Trre16g01168 703 PANTHER PROTEIN DYAD 60 692 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01168 Trre-Chr16 9267501 9272201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01168 303 392 PHD Transcription Factor Family AT5G22260 36.170 2.23e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01168 - - mtr:25502410 838.565