Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g01158 | ATGGCTTTGGTAAGTTCTATGAACTCAATTATGGCTAATCCAAGTGAGGTTAGTGACACAATTTATGTTGCTGTGGCTAAAGATGTGAAAGATAGTAAATTAAATGTGATATGGGCAATACAAAATTCTGGTGGAAAGAGTATTTGTATTCTTCATGTGCATGTGCCAGCTCCAAAGATCCCTATGATGGGAGCTAAATTTCCAGCAAATGCATTGACAAGGCAAGAAGTTAAAGCATACAGGGAAATTGAAAGTCAAGACATGCATAAGACTCTTGATTCTTATCTTCTTATCTGTCAAAGAATGGGGGTGAGGGCAAATAAATTGCACATTGAAATGGATTGTATTGAAAAAGGGATTATAGAACTTATATCCCAACATAACATACAAAACCTTGTAATGGGAGCAGCTTCTGATAAGTACCATTCTAGGAGAATGACAGGTCTCAGATCTAAAAAAGCCATCTATGTATGTGAACAAGCTCCAGCTTCTTGTCATATACAGTTTATCTGCAAAGGTTATCTTATACAAACAAGGGATTGCAGTTTGGATAAACTTAGAGTAGAGGGCACATCTCCATTGGCAAAGCAAATGCAAAACTCTGAAGTTGGTCACTCACCTCATCAATTAAGATCTAAATCAATTTCACATGATGAGTTACTTAGTGTAAGATCTATGAGCTCAGTATCTGAAAGTGGAAGGAGCATAGCATCATCTGTTTCTTCTTCAGAATGGTTTTCAACTTCACAAAGCAAGTTTGATAAAGAACCAAGTTTGAGTCCTTCACCTTCATCAGTTGAAACTGCAGCAGCATTGAACACAAATTTGATTAGTATCAAAGAAGAGGATCTTTATCATTCATCACCTCCAAGTGTGCTGGATGGAGGAAGGGATGATAGTTTGTATGATCAACTTGAACAGGCTATGTCTGAGGCTGAGAAGGCTAGGTGGGATGTGTATCAAGAAACTGTTAGGCGTCGGAAAGCTGAAAAAGATGTCATTGATGCTTTACGCAAGACTACAGACATCAAAATCTTGTACGAAGAAGAGGTGAAACTACGGAAAGACTTAGAGGAGGCTTTAGAGAAAGCAAAAGAAGAAATCGACAACATGAGACACAAAATAGAACAAGTCAATAAGGAACTCGAACTTGCCTTGCATCACAAGTCATCAACAGAGAATCAAATTGGTGAACCCTCAAGAACACAATCTCTTCAACTTTTGTCAGATTTTTCTTTTTCAGAGATTGAAGAAGCAACATGTAACTTCAATCCATCGTTAAAGATTGGTGAAGGCGGATACGGAAGTATATTTAAAGGCAGTCTTCGTCACACTGAAGTGGCTATAAAAATATTGAACCCTAACAGCACTCAAGGACCCTCAGAGTTTCAACAAGAGGTTACGGTATTAAGCAAGTTAAGGCATCCAAATCTTGTCACACTTATAGGAGCAAACCAAGAATCAAGAACTCTTATCTATGAATATTTACCAAATGGAAGCCTCGAGGATCATCTCAGCCGCAACGACAGTAATACCTCTCCATTATCATGGCAGACTCGAATTCGCATCGCGACAGAATTATGTTCTGCTCTAATTTTTCTCCATGCCAATAAACCTCACAGCATAGTGCATGGTGATTTAAAACCTTCCAACATACTTCTTGATGCAAATTTTGTAAGCAAGCTTAGTGACTTTGGAATCTGTCGTATATTATCGTGTCAAGACGATTCTTCAAGTAAAAATAATAGTACACAGTTTTGGATTACTAAATTTGCAAAGGGAACTTTTGCATACATGGATCCTGAATTCTTTGGTACAGGTGAACTTACTACAAAATCAGATGTTTATTCATTTGGAATTGTGTTATTGAGATTGATAACTGGAAAACCAGCATTAGGAATAAAGAATGAAGTGTTAGATGCATTAAATAATGCTGATGGAGAATTGAAATCACTTTTGGATCCTTTAGCTGGAGATTGGCCTATTTCGGAAGCCGAAAATTTGATTCATTTGGCTTTAAGGTGTTGTGATATGAATAAAAGGAGAAGGCCAGAACTTTGTTCAGATGTGTGGAAAGTGTTGGAACCAATGAGAGCTTCTTGTAGTAGTCGCGCAATCACGAACACTTTCGGTCTTAAGTCCTGTTTGGATAAACAACTTAATAGAAAGACTTAA | 2175 | 0.3752 | MALVSSMNSIMANPSEVSDTIYVAVAKDVKDSKLNVIWAIQNSGGKSICILHVHVPAPKIPMMGAKFPANALTRQEVKAYREIESQDMHKTLDSYLLICQRMGVRANKLHIEMDCIEKGIIELISQHNIQNLVMGAASDKYHSRRMTGLRSKKAIYVCEQAPASCHIQFICKGYLIQTRDCSLDKLRVEGTSPLAKQMQNSEVGHSPHQLRSKSISHDELLSVRSMSSVSESGRSIASSVSSSEWFSTSQSKFDKEPSLSPSPSSVETAAALNTNLISIKEEDLYHSSPPSVLDGGRDDSLYDQLEQAMSEAEKARWDVYQETVRRRKAEKDVIDALRKTTDIKILYEEEVKLRKDLEEALEKAKEEIDNMRHKIEQVNKELELALHHKSSTENQIGEPSRTQSLQLLSDFSFSEIEEATCNFNPSLKIGEGGYGSIFKGSLRHTEVAIKILNPNSTQGPSEFQQEVTVLSKLRHPNLVTLIGANQESRTLIYEYLPNGSLEDHLSRNDSNTSPLSWQTRIRIATELCSALIFLHANKPHSIVHGDLKPSNILLDANFVSKLSDFGICRILSCQDDSSSKNNSTQFWITKFAKGTFAYMDPEFFGTGELTTKSDVYSFGIVLLRLITGKPALGIKNEVLDALNNADGELKSLLDPLAGDWPISEAENLIHLALRCCDMNKRRRPELCSDVWKVLEPMRASCSSRAITNTFGLKSCLDKQLNRKT | 724 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g01158 | 724 | CDD | STK_N | 20 | 173 | - | - | |
Trre16g01158 | 724 | MobiDBLite | consensus disorder prediction | 194 | 210 | - | - | |
Trre16g01158 | 724 | MobiDBLite | consensus disorder prediction | 194 | 215 | - | - | |
Trre16g01158 | 724 | ProSiteProfiles | Protein kinase domain profile. | 423 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g01158 | 724 | ProSitePatterns | Protein kinases ATP-binding region signature. | 429 | 450 | IPR017441 | GO:0005524 | |
Trre16g01158 | 724 | Coils | Coil | 343 | 395 | - | - | |
Trre16g01158 | 724 | PANTHER | OS02G0152300 PROTEIN | 21 | 700 | - | - | |
Trre16g01158 | 724 | Pfam | Protein kinase domain | 427 | 685 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g01158 | 724 | SUPERFAMILY | Protein kinase-like (PK-like) | 404 | 695 | IPR011009 | - | |
Trre16g01158 | 724 | FunFam | receptor-like protein kinase FERONIA | 386 | 495 | - | - | |
Trre16g01158 | 724 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 37 | 148 | - | - | |
Trre16g01158 | 724 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 542 | 554 | IPR008271 | GO:0004672|GO:0006468 | |
Trre16g01158 | 724 | Coils | Coil | 302 | 322 | - | - | |
Trre16g01158 | 724 | SMART | serkin_6 | 423 | 697 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g01158 | 724 | Gene3D | Phosphorylase Kinase; domain 1 | 393 | 495 | - | - | |
Trre16g01158 | 724 | Gene3D | Transferase(Phosphotransferase) domain 1 | 496 | 704 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g01158 | Trre-Chr16 | 9175837 | 9180276 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g01158 | 10 | 700 | U-box Gene Family | AT2G45910 | 46.854 | 0.0 | 639 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Trre16g01158 | Pkinase | 3.4e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g01158 | - | - | tpra:123883511 | 1207.2 |