Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01151 ATGGAAACTTGTACGGCTCTATTGCTTTTAACGGCTATTACAGCTTATTTACTGTGGTTCACTTTCATCTCACGGTCATTGAAAGGTCCACGTGTCTGGCCACTATTGGGCAGTCTACCGGGCCTAATCGAGAATTGTGAACGTATGCATGATTGGATCTGTGACAACCTCCGCGCGTGTGGTGGCACGTACCAGACTTGCATCTGTGCAATCCCTTTTTTAGCTAAGAAGCAAGGTCTCGTGACGGTCACGTGCGACCCGAGGAACTTGGAGCATATATTGAAGACCCGGTTCGACAATTACCCGAAAGGTCCGACGTGGCAAGCAGTGTTTCATGATTTGTTGGGTGATGGGATTTTTAACTCTGATGGTAACACGTGGTTGTTCCAGCGTAAGACAGCCGCGCTGGAATTCACCACCCGGACATTGCGCCAAGCCATGGCTCGATGGGTTAGCCGAGCCATCAAGGATCGGCTTTGCACGATTTTGAAGAAAGCTGAGGTGCAAGGTGAACCGGTGGATCTACAAGACGTGATGCTTCGGCTCACTTTTGACAATATTTGTGGCTTGGCTTTTGGGAGAGACCCGCAGACATGTGCCACAGGTCTGCCTGAAAACGGCTTTGCGACCGCTTTTGATAAAGCCACGGAAGCCACGCTTCAGCGGTTTATTTTACCTGAGGTGTTTTGGAAGGTGAAGAAATGGCTTGGGCTTGGTATGGAAGTCGGCTTGAGCCGAAGCCTTGGTTTTGTGGATGAGCATTTGTCAAGTGTTATTGAGAAGCGTAAAATCGAATTGATGAGTCAGCAAAAAGATGGGTCACTTCTTCATGATGACTTGCTGACTAGATTTATGAGGAAGAAAGAATCCTATTCGGACAAGTTTCTTCAACATGTGGCATTGAACTTCATCCTAGCTGGACGTGACACGTCATCGGTTGCGTTGAGCTGGTTTTTCTGGCTGGTAATTCAAAATCCAAGGGTGGAAGAGAAGATCTTACGCGAGATCTGCACGGTCTTGATGGAGACACGTGGCGCTGACATGGAAAAGTGGACGGATGAGCCTTTGGGATTTGAAGAAGTTGATCGTTTGGTTTATCTTAAAGCTGCTTTGTCGGAGACACTAAGGTTGTACCCTTCGGTGCCAGAGGATTCAAAGCATGTGGTGAACGATGACGTGTTGCCGGATGGAACATTTGTTCCGGCAGGATCATCGGTGACATACTCGATATATTCAGCCGGGAGATTGAAGTCAACATGGGGTGAGGATTGCTTGGAATTTAAACCTGAGAGGTGGATGTCATTGGATGGGACAAAGTTCATCATGCATGACTCTTTCAAGTTTGTTGCATTCAATGCTGGCCCTAGAATATGTTTGGGGAAGGATTTAGCATATCTTCAGATGAAGTCTATCGCCGCTGCTGTTCTGCTTCGCCACCGGCTTGCGGTGGTTCCCGGTCACCAGGTGGAGCAAAAGATGTCACTCACCTTGTTCATGAAAAATGGGCTCAGGGTTAATGTTTACAACAGGGATTTGAAGGGTGTTTTTGCAAATATAGAAAATGAAAAGGTGGGAGAGATTCAGGGGAAAGTGTCCAATGATTTGAAATGCAATGGAAGCTAG 1623 0.4726 METCTALLLLTAITAYLLWFTFISRSLKGPRVWPLLGSLPGLIENCERMHDWICDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHDLLGDGIFNSDGNTWLFQRKTAALEFTTRTLRQAMARWVSRAIKDRLCTILKKAEVQGEPVDLQDVMLRLTFDNICGLAFGRDPQTCATGLPENGFATAFDKATEATLQRFILPEVFWKVKKWLGLGMEVGLSRSLGFVDEHLSSVIEKRKIELMSQQKDGSLLHDDLLTRFMRKKESYSDKFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRVEEKILREICTVLMETRGADMEKWTDEPLGFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVNDDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCLEFKPERWMSLDGTKFIMHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLAVVPGHQVEQKMSLTLFMKNGLRVNVYNRDLKGVFANIENEKVGEIQGKVSNDLKCNGS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01151 540 SUPERFAMILY Cytochrome P450 27 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 FunFam Cytochrome P450 21 513 - -
Trre16g01151 540 Pfam Cytochrome P450 28 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Trre16g01151 540 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01151 540 CDD CYP86A 67 503 - -
Trre16g01151 540 PANTHER CYTOCHROME P450 19 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01151 Trre-Chr16 9125402 9127024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01151 1 539 Cytochrome P450 AT2G45970 77.222 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01151 K15398 - gmx:100779986 948.732