Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01146 ATGTCACTCATTTTCATTTTCCTTTTCTTTCTCTTATCTCATTTCACTCTCTTCACTTCTTCTTCACCCATCAACAGCAACAACTCCAATGCCATTCTTTTAACATCAAACCAAACCCTCTTAAGCCAAAATCAAACCTTTCAACTTTGTTTCTTAAATTTACAAAACCAAAACCAACAACAACAACAACCTCGTTATTATCTAGTTATCCGTTTCACTTCTCTTCCTTCACCCAACATCATTTGGGTCGCAAACCGTAACAAACCCATTTCATCTCTTTCCGGTTCATCTCTTCAATTAACTCAAACCGGTCAATTACTACTCCTCACTCAAAACGCAGTCGTTTTATGGCAAACCAAAACCCATTTCAACACAAACAACAACACCTTACTCCAACCGAAGCTTTTAGAAAATGGTAACTTCATTCTTGTTAATCAAAACGGTGTAGTTTTATGGCAAAGCTTTGATGAACCAACTGACACGTGGCTACCAGGTATGAATCTAACTAGGGTTCATAATTTACTTTCATGGAGAACTTTAACAGACCCTGGTAATGGTTTTTATTCATTAAGGTTGGAACCACCGAATTATGGTCAATTTGAGTTAGTTTACAATGAAACTGTTTCTTATTGGTCTACTGGTAATTGGACTGGTGGGTCATTTAGTGATGTTCCTGAGATGATGATTCCTTATCTTTATCGGTTTGATTTTAAAGACGCGTTTTCACCGACTGCGTCGTTTGGATTCTCGGAACGGGCGATGGATAATGGTGTTAGACCGCCTACGATGTTTCGTGTTGAGCCATTTGGTCAGATTCGACAGTATACTTGGTCGAATCAAGCTGGTTCGTGGAATATGTTTTGGTCGAGGCCTGAATCGATTTGTTCGGTTCGGGGTGTTTGTGGGAGGTTTGGTGTTTGTACGGGTGATATGTCGAGGCTTTGTGAGTGTGTTAAGGGTTTTGTGGCGGTGGATGGCGGTGGTTGGGGTTCGGGTGATTATTCGGAAGGTTGTTGGAGAGGGGAGAAGGTTTGTGATGAAAATGATGGTTTTGAAGATTTGGGTGTTGTTAGGTTTGGTTTTGGTAATGTGAGTACTTTTAGTGCTAAAACTAGAAGCTTGTGTGAGAGTGGTTGTTTGGGTTCTTGTGATTGTGTTGGTTTGTCTTTTGATGAAAAGAGTGGCTTTTGTAAGAATTATTTTGGGTCTCTTTTTGATTTTCAAAATTTAACTGCTTTGGAGAGTGGTGGTGGTGGTGGTGATGGTGACAGGAATGTGTTGTATGTTAGGGTTCCTGGCGGCGGGGGTGAGGGGAAGATTAAGAGGTTGAGTGGTAAGGTTTTGAGTGGTATTGTAATTGGGTGTGTTTTGTTTTTGGTTTTGGGTGTGGTGGTGGTGACTTTGGTGGTGTTGGTAAAGAGGAAGAGATTGAAGGAGAAGGAGAACGGGTTGGAGGATGATGGATTTGTTCCTATTTTGAATTTGAAGGTGTTTTCTTACAAGGAGCTTCAATTGGCGACTCGAGGGTTTTCTGAGAAAGTTGGGCATGGTGGGTTTGGGACGGTGTTTCAAGGGGAGTTGAGTGATTCTACAGTTGTTGCAGTGAAGCGTTTGGAGAGGCCCGGAGGTGGGGAGAAAGAGTTTAGGGCTGAGGTTTCAACAATTGGGAACATTCAACATGTTAATCTTGTGAGGCTAAGAGGTTTTTGCTCTGAGAATGCACATCGACTTTTGGTTTATGAGTACATGCCGAATGGTGCCCTTAGCGCTTATCTGCGAAAGGATGGGCCGTATTTGAGTTGGGATGTTAGGTTCAGAGTGGCGATTGCAACTGCTAAAGGCATAGCGTATTTGCACGAGGAATGTAGAAGTTGCATTATACATTGTGATATCAAACCTGAAAACATTCTTTTGGATGGTGATTTCACTGCCAAGGTTTCTGATTTTGGATTGGCAAAGCTCATCGGCAGGGATTTCAGTAGGGTTTTGGCAACCATGAGGGGTACTTGGGGATATGTAGCACCGGAGTGGATTTCTGGCGTTGAAATTACAACTAAAGCTGATGTTTACAGCTATGGAATGACATTGCTAGAACTCGTAAGCGGTCGCCGGAATGTGGAGGCACCGCCTTCGTCTAGTGATAGAAAGAGTGGTTGTGAAACAGAGGAGAAATGGTTCTTTCCTCCGTGGGCAGCACAGCTGATAATCGAGGATAACGTAGCTGCTGTGGTTGATAAGAAGCTTGGAAATGTATATAACATTGAGGAGGCCAAGAGAGTTGCGTTGGTAGCAGTTTGGTGCATTCAGGATGATGAGGCAATGAGACCTACCATGGGTATGGTGGTGAAAATGTTAGAGGGATTAGTAGAGGTTGCTCTTCCACCGCCGCCTAAGTTGCTACAAGCATTGGTTGCCGGAGAGTCCTTTCACGGTGTCAAGGCTGACTCGAGTAATGCAGTTTCTACTGTTGGCAGTTCATCTGCCGACGACAACATGGAAGTGTCGGCTGCTGATTCAGAATCATCTAAAGGAGATGTTTTTTCACAGTTGGATTGCATTGTCAATGTTCGATAA 2574 0.4301 MSLIFIFLFFLLSHFTLFTSSSPINSNNSNAILLTSNQTLLSQNQTFQLCFLNLQNQNQQQQQPRYYLVIRFTSLPSPNIIWVANRNKPISSLSGSSLQLTQTGQLLLLTQNAVVLWQTKTHFNTNNNTLLQPKLLENGNFILVNQNGVVLWQSFDEPTDTWLPGMNLTRVHNLLSWRTLTDPGNGFYSLRLEPPNYGQFELVYNETVSYWSTGNWTGGSFSDVPEMMIPYLYRFDFKDAFSPTASFGFSERAMDNGVRPPTMFRVEPFGQIRQYTWSNQAGSWNMFWSRPESICSVRGVCGRFGVCTGDMSRLCECVKGFVAVDGGGWGSGDYSEGCWRGEKVCDENDGFEDLGVVRFGFGNVSTFSAKTRSLCESGCLGSCDCVGLSFDEKSGFCKNYFGSLFDFQNLTALESGGGGGDGDRNVLYVRVPGGGGEGKIKRLSGKVLSGIVIGCVLFLVLGVVVVTLVVLVKRKRLKEKENGLEDDGFVPILNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTVVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENAHRLLVYEYMPNGALSAYLRKDGPYLSWDVRFRVAIATAKGIAYLHEECRSCIIHCDIKPENILLDGDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVEITTKADVYSYGMTLLELVSGRRNVEAPPSSSDRKSGCETEEKWFFPPWAAQLIIEDNVAAVVDKKLGNVYNIEEAKRVALVAVWCIQDDEAMRPTMGMVVKMLEGLVEVALPPPPKLLQALVAGESFHGVKADSSNAVSTVGSSSADDNMEVSAADSESSKGDVFSQLDCIVNVR 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01146 857 SUPERFAMILY Protein kinase-like (PK-like) 492 786 IPR011009 -
Trre16g01146 857 PIRSF SRK 1 840 IPR024171 GO:0004674
Trre16g01146 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Trre16g01146 857 Gene3D - 23 155 IPR036426 -
Trre16g01146 857 SMART blect_4 31 158 IPR001480 -
Trre16g01146 857 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 216 IPR036426 -
Trre16g01146 857 Gene3D Transferase(Phosphotransferase) domain 1 583 792 - -
Trre16g01146 857 Pfam D-mannose binding lectin 80 171 IPR001480 -
Trre16g01146 857 ProSiteProfiles Protein kinase domain profile. 508 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01146 857 Pfam Protein kinase domain 511 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01146 857 ProSiteProfiles Bulb-type lectin domain profile. 25 156 IPR001480 -
Trre16g01146 857 FunFam Receptor-like protein kinase 4 469 582 - -
Trre16g01146 857 SMART serkin_6 508 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01146 857 FunFam S-receptor-like kinase 5 583 794 - -
Trre16g01146 857 Pfam S-locus glycoprotein domain 211 323 IPR000858 GO:0048544
Trre16g01146 857 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Trre16g01146 857 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Trre16g01146 857 MobiDBLite consensus disorder prediction 818 840 - -
Trre16g01146 857 CDD STKc_IRAK 514 788 - -
Trre16g01146 857 PANTHER OS07G0415500 PROTEIN 5 798 - -
Trre16g01146 857 Gene3D Phosphorylase Kinase; domain 1 473 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01146 Trre-Chr16 9011850 9014423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01146 498 795 Receptor kinase-like Gene Family AT5G20050 46.302 4.53e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre16g01146 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01146 - - lja:Lj0g3v0252549.1 1139.41