Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01135 ATGGGAAGGAATATTGTGTTGCAAGAATCTCCGAATGATCCTGGAAAACGCAGTAGGTTATGGTCTCAAAAAGACATTGATCAAGTTTTGAGAAAAAATAAGGGAACTGATAAAATTCAAGGCATATTTATGGACTTAGTTGAACCATATGAAGCAAATTGGAACATAGAAGCCATCTCCAAAATAAGTCAGCTAAGATTTCTCAAATTATGTGAAATAAAACTTCCCCTTGGCCTCAATTGTTTGCCTAGTTCACTAAAAGTTCTTGATTGGAGAGGTTGTCCTTTGAAAACCCTGCCACTCAATAATCATTTGGATGAAATTGTTGATATGAAATTGTCTCATAGCAAAATAGAACAACTTTGGCATGGAACACAGTTTCTTGAAAATCTGAAGTCCATCTACTTGAGCTTTTCGATGTCTCTAAAGCGATCGCCGGACTTTGTTGGTGTTCCAAATCTTGAATTATTGGTTCTTGATGGTTGTGCAAGCTTAACTGAGATTCATCCCTCCCTTTTAAACCACAAAAAACTTGTTCTATTGAGTTTGAAAGGTTGCAAAAGGCTCAAAACTCTTCCATGTAAAATAGAGATGAGTTCCTTGAAGGTTTTACTTCTTTCTGGTTGCTGTGAATTTAAACGTCTTCCGGAGTTCGATGAAAGCATGAAAAATTTGTCACAGCTTTATCTAGAAGAGACTGCTATAACAAAACTACCATCTTCACTTGGATTTCTTGAATCTCTTACTCTTTTGGATTTAGAAAATTGCAAGAATCTTGTTTGTCTTCCAGATACAATAAGTGAGTTGAAGTCCCTCTTAACTCTAAATGTTTCTGGATGCTCGAAAATCTGTAGTTTTCCAGAAGGTCTAAAAGAAATCAAGTCTTTGGAGGAACTCTTGGCAAATGAAACTGCTATTGAAGAACTACCTTCATCGGTTTTTTATCTCGAAAACCTCAAAGTAATATCATTTTCTGGATGCAAAGGAGTAGTTTCTAAGTCAGTGAATACATTTTTTCTACCCTTTTCACAGCTACTAGGTAGTCCACAAGAACCTACTGGATTTAGATTGCCACCTAAGTTATCTCTACCCTCTTTGGTAAAATTAAATTTAAGTTATTGCAATCTATCTGAAAATTCAATGCCAACAGATTTTTCCAACTTATCTTCCTTGATTGCTTTGAATCTCGACGGAAACAATTTTGTTAGTACACCAAGTTGCATTTCACAACTTCCAAAGCTTGAACTTCTTGGCTTAAACTGCTGTGAAATGCTTCAGACATTGCCAGAGTTTCAATCAAGTATGAGGTTATTGGATGCAACTAATTGTGGTTCATTTGAAACTTCTGAATCCAATCTATCTAGACCATGCAGTCTCTTTGCTTCGCATCCACAACGACACTCCCATTTACCAAGAGCACTGAAGAGCTATGTGGAGGCACAGGAACTTGGTCTACCTAAAGCAAGATTTGACATGCTTATCACAGGGAGTGAAATTCCATCATGGTTTACACGTTCAAAATATGTTACTTGTACACATATGTCAGTCCCTCGTGATTATCCTCCAACTGAATGGGTGGGAATTGCTTTGTGTTTCATGTTGGTAGATTTTCATGATCAACCTGAGTTGTGTGATCATGAAGTAAGTTGTTACTTGTATGGACCCAATGGTAAGTTGTTTATCAAAAGCCGGCATTTATCTCCTATGGAACCATATGTTCGTCACCTTTATATTCTCTATCTATCCATCGATGAATGTCGTGAGAGATTTTGTGAAGGTGGTGACTGCAGTCAAATTGAATTTGTCTTGAAAACTTATTGCTGTGATTCATATCAAGTTAAAGGGTGCGGTTCTCGCTTGGTATGCAAGCAAGATGTTGAAGATTTTCACAGAAATTATTACTAG 1905 0.3685 MGRNIVLQESPNDPGKRSRLWSQKDIDQVLRKNKGTDKIQGIFMDLVEPYEANWNIEAISKISQLRFLKLCEIKLPLGLNCLPSSLKVLDWRGCPLKTLPLNNHLDEIVDMKLSHSKIEQLWHGTQFLENLKSIYLSFSMSLKRSPDFVGVPNLELLVLDGCASLTEIHPSLLNHKKLVLLSLKGCKRLKTLPCKIEMSSLKVLLLSGCCEFKRLPEFDESMKNLSQLYLEETAITKLPSSLGFLESLTLLDLENCKNLVCLPDTISELKSLLTLNVSGCSKICSFPEGLKEIKSLEELLANETAIEELPSSVFYLENLKVISFSGCKGVVSKSVNTFFLPFSQLLGSPQEPTGFRLPPKLSLPSLVKLNLSYCNLSENSMPTDFSNLSSLIALNLDGNNFVSTPSCISQLPKLELLGLNCCEMLQTLPEFQSSMRLLDATNCGSFETSESNLSRPCSLFASHPQRHSHLPRALKSYVEAQELGLPKARFDMLITGSEIPSWFTRSKYVTCTHMSVPRDYPPTEWVGIALCFMLVDFHDQPELCDHEVSCYLYGPNGKLFIKSRHLSPMEPYVRHLYILYLSIDECRERFCEGGDCSQIEFVLKTYCCDSYQVKGCGSRLVCKQDVEDFHRNYY 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01135 634 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 199 333 - -
Trre16g01135 634 Gene3D Ribonuclease Inhibitor 350 517 IPR032675 -
Trre16g01135 634 Gene3D Ribonuclease Inhibitor 48 196 IPR032675 -
Trre16g01135 634 Gene3D Ribonuclease Inhibitor 197 344 IPR032675 -
Trre16g01135 634 SUPERFAMILY RNI-like 361 452 - -
Trre16g01135 634 SUPERFAMILY L domain-like 8 329 - -
Trre16g01135 634 SMART LRR_typ_2 363 387 IPR003591 -
Trre16g01135 634 SMART LRR_typ_2 222 245 IPR003591 -
Trre16g01135 634 SMART LRR_typ_2 388 411 IPR003591 -
Trre16g01135 634 SMART LRR_typ_2 293 316 IPR003591 -
Trre16g01135 634 SMART LRR_typ_2 151 175 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01135 Trre-Chr16 8920457 8923408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01135 2 324 WRKY Transcription Factor Family AT4G12020 39.706 1.64e-55 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01135 - - gmx:100815486 810.446