Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g01134 | ATGGCATATACCTTCATAGATGATGAAGCCTCTTCATCTTCAATCCAAAGTTCAAGTTGGACAAACCATGTTTTCTTGAGTTTTAGAGGTGAAGATACTCGCCATGGTTTCACTGATCATCTTTTTGCTTCATTAGAAAGAAGAGGTATCAAAACATTTAAGGATGATTATGACCTTAAGAGAGGAGAAAAGATATCAAATGAACTCAATAAAGCCATTGAAGAATCTATGTTTGCTATCATCATTCTCTCATCAAACTATGCTTCTTCAACATGGTGTTTAGATGAGTTACAAAAGATTGTTGAATGCAACAAAAGTTTTGGTCAAGCTGTTTTTCCAATCTTCTATGGTGTTGATCCTTCTGATGTTAGGCATCAGAGAGGAAGCTTTGATGAAGCTTTTAAGAAACATGATGAAAAATTCAGAAAAGATAGAATGAAAGTTAAAAGATGGAGAGATGCTTTAAGAGAAGTTGCTAGTTACTCTGGTTGGGACTCCAAGGGCCGGCATGAGGCATCCTTGGTGGAAACAATAGTTGAACATATTCAGAAAAAATTGATTCCAAGATTGAAGGTTAAAGATAATCTTGTTGGAATGGATTCGCGGATAAAGGAAGTATATTCGCTACTAGGAATGAGGCTAAACGACGTTCGCTTCATAGGCATATGGGGCATGGGCGGCATAGGAAAGACAACTGTTGCTAGAGAACTTTTTGAAGCGATCAAAGACGAATTCAAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAGTTTCTAAGACAAATGGCTTAGTTCACATCCAAAGTGAACTTCTTTCGCATCTCAATATAAGAAGCAACGATTTTTATAACGTTTATGATGGCAAAAAGATATTAGCAAACTCCTTAAGAAACAAAAAAGTTCTTCTTGTTCTTGATGATGTAAGTGAATTAAGCCAATTGGAGAATTTAGCTTGGAAGCAAGAATGGTTTGGTCCAGGAAGTAGAGTAATAATCACAAGTAGAGATAAGCACTTGCTAACAACTCATGGAGTGCATAAAACTTATAAGGCTCAAGGTTTAGTGAAAAAAGAAGCACTTAAGCTATTTTGTTTGAAAGCCTTTAAACAAAATCAACCTAAAGAAGAGTATTTGAGTTTGTGTCAAGAAGTGGTTGAATATGCAAAAGGTCTTCCATTAGCACTTGAAGTATTGGGTTCACATCTTTATGGAAGAGCTGTTGAAGTTTGGCATAGTGCTTTAGAACAAATAAGAAGTGTTCCTCATTCCAAAATTCATGATACATTGAAAATAAGCTATGATAGCTTACAATCTATGGAGAAAAATATGTTTCTAGATATTGCTTGTTTCTTCAAAGGAATGGAAATAAATGCAGTAATAGAAATATTGGAAGATTGTGGTGATTTTCCCAAAATTGGAATTGACATTTTGATTGAAAGATCATTGGTAACTTTTGATAGGGGACATAATATTTTGTGGATGCATGATTTGCTTCAAGAAATGGGAAGGAATATTGTGTTGCAAGAATCTCCGAATGATCCTGGAAAACGCAGTAGGTTATGGTCTCAAAAAGACATTGATCAAGTTTTGAGAAAAAATAAGGGAACTGATAAAATTCAAGGCATATTTATGGACTTAGTTGAACCATATGAAGCAAATTGGAACATAGAAGCCATCTCCAAAATAAGTCAGCTAAGATTTCTCAAATTATGTGAAATAAAACTTCCCCTTGGCCTCAATTGTTTGCCTAGTTCACTAAAAGTTCTTGATTGGAGAGGTTGTCCTTTGAAAACCCTGCCACTCAATAATCATTTGGATGAAATTGTTGATATGAAATTGTCTCATAGCAAAATAGAACAACTTTGGCATGGAACACAGTTTCTTGAAAATCTGAAGTCCATCTACTTGAGCTTTTCGATGTCTCTAAAGCGATCGCCGGACTTTGTTGGTGTTCCAAATCTTGAATTATTGGTTCTTGATGGTTGTGCAAGCTTAACTGAGATTCATCCCTCCCTTTTAAACCACAAAAAACTTGTTCTATTGAGTTTGAAAGGTTGCAAAAGGCTCAAAACTCTTCCATGTAAAATAGAGATGAGTTCCTTGAAGGTTTTACTTCTTTCTGGTTGCTGTGAATTTAAACGTCTTCCGGAGTTCGATGAAAGCATGAAAAATTTGTCACAGCTTTATCTAGAAGAGACTGCTATAACAAAACTACCATCTTCACTTGGATTTCTTGAATCTCTTACTCTTTTGGATTTAGAAAATTGCAAGAATCTTGTTTGTCTTCCAGATACAATAAGTGAGTTGAAGTCCCTCTTAACTCTAAATGTTTCTGGATGCTCGAAAATCTGTAGTTTTCCAGAAGGTCTAAAAGAAATCAAGTCTTTGGAGGAACTCTTGGCAAATGAAACTGCTATTGAAGAACTACCTTCATCGGTTTTTTATCTCGAAAACCTCAAAGTAATATCATTTTCTGGATGCAAAGGAGTAGTTTCTAAGTCAGTGAATACATTTTTTCTACCCTTTTCACAGCTACTAGGTAGTCCACAAGAACCTACTGGATTTAGATTGCCACCTAAGTTATCTCTACCCTCTTTGGTAAAATTAAATTTAAGTTATTGCAATCTATCTGAAAATTCAATGCCAACAGATTTTTCCAACTTATCTTCCTTGATTGCTTTGAATCTCGACGGAAACAATTTTGTTAGTACACCAAGTTGCATTTCACAACTTCCAAAGCTTGAACTTCTTGGCTTAAACTGCTGTGAAATGCTTCAGACATTGCCAGAGTTTCAATCAAGTATGAGGTTATTGGATGCAACTAATTGTGGTTCATTTGAAACTTCTGAATCCAATCTATCTAGACCATGCAGTCTCTTTGCTTCGCATCCACAACGACACTCCCATTTACCAAGAGCACTGAAGAGCTATGTGGAGGCACAGGAACTTGGTCTACCTAAAGCAAGATTTGACATGCTTATCACAGGGAGTGAAATTCCATCATGGTTTACACGTTCAAAATATGTTACTTGTACACATATGTCAGTCCCTCGTGATTATCCTCCAACTGAATGGGTGGGAATTGCTTTGTGTTTCATGTTGGTAGATTTTCATGATCAACCTGAGTTGTGTGATCATGAAGTAAGTTGTTACTTGTATGGACCCAATGGTAAGTTGTTTATCAAAAGCCGGCATTTATCTCCTATGGAACCATATGTTCGTCACCTTTATATTCTCTATCTATCCATCGATGAATGTCGTGAGAGATTTTGTGAAGGTGGTGACTGCAGTCAAATTGAATTTGTCTTGAAAACTTATTGCTGTGATTCATATCAAGTTAAAGGGTGCGGTTCTCGCTTGGTATGCAAGCAAGATGTTGAAGATTTTCACAGAAATTATTACTAG | 3405 | 0.3601 | MAYTFIDDEASSSSIQSSSWTNHVFLSFRGEDTRHGFTDHLFASLERRGIKTFKDDYDLKRGEKISNELNKAIEESMFAIIILSSNYASSTWCLDELQKIVECNKSFGQAVFPIFYGVDPSDVRHQRGSFDEAFKKHDEKFRKDRMKVKRWRDALREVASYSGWDSKGRHEASLVETIVEHIQKKLIPRLKVKDNLVGMDSRIKEVYSLLGMRLNDVRFIGIWGMGGIGKTTVARELFEAIKDEFKVSCFLADIRETVSKTNGLVHIQSELLSHLNIRSNDFYNVYDGKKILANSLRNKKVLLVLDDVSELSQLENLAWKQEWFGPGSRVIITSRDKHLLTTHGVHKTYKAQGLVKKEALKLFCLKAFKQNQPKEEYLSLCQEVVEYAKGLPLALEVLGSHLYGRAVEVWHSALEQIRSVPHSKIHDTLKISYDSLQSMEKNMFLDIACFFKGMEINAVIEILEDCGDFPKIGIDILIERSLVTFDRGHNILWMHDLLQEMGRNIVLQESPNDPGKRSRLWSQKDIDQVLRKNKGTDKIQGIFMDLVEPYEANWNIEAISKISQLRFLKLCEIKLPLGLNCLPSSLKVLDWRGCPLKTLPLNNHLDEIVDMKLSHSKIEQLWHGTQFLENLKSIYLSFSMSLKRSPDFVGVPNLELLVLDGCASLTEIHPSLLNHKKLVLLSLKGCKRLKTLPCKIEMSSLKVLLLSGCCEFKRLPEFDESMKNLSQLYLEETAITKLPSSLGFLESLTLLDLENCKNLVCLPDTISELKSLLTLNVSGCSKICSFPEGLKEIKSLEELLANETAIEELPSSVFYLENLKVISFSGCKGVVSKSVNTFFLPFSQLLGSPQEPTGFRLPPKLSLPSLVKLNLSYCNLSENSMPTDFSNLSSLIALNLDGNNFVSTPSCISQLPKLELLGLNCCEMLQTLPEFQSSMRLLDATNCGSFETSESNLSRPCSLFASHPQRHSHLPRALKSYVEAQELGLPKARFDMLITGSEIPSWFTRSKYVTCTHMSVPRDYPPTEWVGIALCFMLVDFHDQPELCDHEVSCYLYGPNGKLFIKSRHLSPMEPYVRHLYILYLSIDECRERFCEGGDCSQIEFVLKTYCCDSYQVKGCGSRLVCKQDVEDFHRNYY | 1134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g01134 | 1134 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 23 | 718 | IPR044974 | GO:0006952 | |
Trre16g01134 | 1134 | Gene3D | - | 353 | 443 | IPR042197 | - | |
Trre16g01134 | 1134 | Gene3D | - | 184 | 349 | IPR027417 | - | |
Trre16g01134 | 1134 | SMART | LRR_typ_2 | 793 | 816 | IPR003591 | - | |
Trre16g01134 | 1134 | SMART | LRR_typ_2 | 651 | 675 | IPR003591 | - | |
Trre16g01134 | 1134 | SMART | LRR_typ_2 | 888 | 911 | IPR003591 | - | |
Trre16g01134 | 1134 | SMART | LRR_typ_2 | 863 | 887 | IPR003591 | - | |
Trre16g01134 | 1134 | SMART | LRR_typ_2 | 722 | 745 | IPR003591 | - | |
Trre16g01134 | 1134 | Gene3D | Ribonuclease Inhibitor | 852 | 1016 | IPR032675 | - | |
Trre16g01134 | 1134 | Pfam | NB-ARC domain | 214 | 439 | IPR002182 | GO:0043531 | |
Trre16g01134 | 1134 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 18 | 188 | - | - | |
Trre16g01134 | 1134 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 355 | 437 | - | - | |
Trre16g01134 | 1134 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 11 | 164 | IPR035897 | - | |
Trre16g01134 | 1134 | Pfam | TIR domain | 23 | 186 | IPR000157 | GO:0007165 | |
Trre16g01134 | 1134 | PRINTS | Disease resistance protein signature | 743 | 759 | - | - | |
Trre16g01134 | 1134 | PRINTS | Disease resistance protein signature | 388 | 402 | - | - | |
Trre16g01134 | 1134 | PRINTS | Disease resistance protein signature | 219 | 234 | - | - | |
Trre16g01134 | 1134 | PRINTS | Disease resistance protein signature | 295 | 309 | - | - | |
Trre16g01134 | 1134 | SMART | till_3 | 21 | 161 | IPR000157 | GO:0007165 | |
Trre16g01134 | 1134 | Gene3D | Ribonuclease Inhibitor | 697 | 838 | IPR032675 | - | |
Trre16g01134 | 1134 | Gene3D | - | 18 | 183 | IPR035897 | - | |
Trre16g01134 | 1134 | ProSiteProfiles | TIR domain profile. | 20 | 186 | IPR000157 | GO:0007165 | |
Trre16g01134 | 1134 | SUPERFAMILY | L domain-like | 508 | 829 | - | - | |
Trre16g01134 | 1134 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 190 | 447 | IPR027417 | - | |
Trre16g01134 | 1134 | Gene3D | Ribonuclease Inhibitor | 551 | 696 | IPR032675 | - | |
Trre16g01134 | 1134 | SUPERFAMILY | "Winged helix" DNA-binding domain | 423 | 530 | IPR036390 | - | |
Trre16g01134 | 1134 | SUPERFAMILY | L domain-like | 761 | 966 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g01134 | Trre-Chr16 | 8920457 | 8925672 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g01134 | 17 | 824 | WRKY Transcription Factor Family | AT4G12020 | 33.978 | 5.12e-115 | 391 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g01134 | - | - | gmx:100815486 | 1536.16 |