Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01114 ATGGAGGAAGATTGGGATCTATTTGCAGTAGTCAGACCCTACACCACCATCACCTCTTCCTCTTCCACCACCACAACAGCCACCTCGTCTACACCTTCTTCCTCTGGTTTTGAAACTTCAACATCTTGCAACTTCTCTCTTTATCCTACAGAAAATTCAAGTCAAGTTTTGTTACTTTCAAACCCCTTGGAACCAAAAAAATCCATTGAAGAATTGCATGATCTTTGCAAACCTTTCTTCCTTAAACCACAACATCTCTCTTCTAATTCATTCTCTTATTCATCACCATCACCAAAATCACCTCACATACAACCAAAACAACAACAAATTAATAAGAATTCTCACCATGTTGTCTCTGCTACACCCCCAAGATCTAAAAGAAGAAAGATTCAACATAAGAAGGTATGTGAAGTGCAAGCTGAGAATCTCTCATCAGATATATGGGCATGGAGGAAATATGGTCAAAAACCCATCAAAGGGTCACCATATCCAAGGGGATATTATCGATGTAGTAGTTCAAAAGGGTGTTTAGCTAGAAAACAAGTTGAGAGGAACAAATCAGACCCAACAATGTTTATAGTAACGTACACTGGTGAACATAGTCACCCTGCTCCAACTCATAGAAATTCTCTTGCTGGTTCAACAAGGCAGAAGCCATTGTCACCACAAATTGTCACCGCTGATGACTCTTCTCAACCCTTTGCAAAACAAGTTTCTCCATCTACTTCAGGAGCTGAAGAGGAAAATACTACACCCTTAAGTGCAAAATCAGATAGCAAGGATTTGGAAGATTTGATGAATGATGATGATGATGATGTGGAAAATGAATTTGAGTTATCTGATATGGTTGTAACAGATGATTTCTTTGAAGGTTTAGATGAATTGACAGGTTTTGCAGGAAAAACAATAGCATCTAGTGGTGATTGTTTTGGTGACCCATTTGCAGCTAGTATTGCACTTCCTGCTTGTGGTGGCCAGTGA 981 0.3935 MEEDWDLFAVVRPYTTITSSSSTTTTATSSTPSSSGFETSTSCNFSLYPTENSSQVLLLSNPLEPKKSIEELHDLCKPFFLKPQHLSSNSFSYSSPSPKSPHIQPKQQQINKNSHHVVSATPPRSKRRKIQHKKVCEVQAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPTMFIVTYTGEHSHPAPTHRNSLAGSTRQKPLSPQIVTADDSSQPFAKQVSPSTSGAEEENTTPLSAKSDSKDLEDLMNDDDDDVENEFELSDMVVTDDFFEGLDELTGFAGKTIASSGDCFGDPFAASIALPACGGQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01114 326 FunFam WRKY transcription factor 22 128 198 - -
Trre16g01114 326 Gene3D WRKY domain 128 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre16g01114 326 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g01114 326 SUPERFAMILY WRKY DNA-binding domain 141 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre16g01114 326 MobiDBLite consensus disorder prediction 90 132 - -
Trre16g01114 326 Pfam WRKY DNA -binding domain 146 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g01114 326 MobiDBLite consensus disorder prediction 198 270 - -
Trre16g01114 326 ProSiteProfiles WRKY domain profile. 139 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre16g01114 326 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 296 IPR044810 GO:0003700
Trre16g01114 326 MobiDBLite consensus disorder prediction 90 120 - -
Trre16g01114 326 MobiDBLite consensus disorder prediction 202 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01114 Trre-Chr16 8781077 8782812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01114 1 308 WRKY Transcription Factor Family AT4G01250 47.152 1.73e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre16g01114 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01114 K13425 - gmx:100798084 338.576