Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g01098 | ATGAACATTTTTCCTACCATACTCATTATTGCTAACATACTATTTTTCTTCTCCAAAATTTCTTCTGCAAAAGATACCATTACACAATCACAACCACTTCCCGATGGAAGCACCTTGGTTTCTAAGGATGGAATATTTGAGTTAGGTTTCTTCAATCTAGGTGATTCCACAAACCGCTATGTTGGAATTTGGTACAAAAATACTGATAGAAGAGTTGTTTGGGTTGCTAATCGTGACAATCCAATCAAAGACAATTCTAGCAAGTTAATCATAAGTCGAAATGGAAACCTTGTGCTTCTAAATCAAAATCAAACTCTTCTATGGTCAACAAAGACAACAACAACAACAACAAAAACAAAGGTTGCAATTTCAAGTCCAATTGTGCAACTTTTGGACAATGGAAATTTAGTACTTAAAAATGAGAACCAAGACAACACTGATGAAAATTTTCTATGGCAGAGTTTTGATTATCCTTGTGATACAGTATTACCAGGAATGAAAGTGGGATGGGACAAAAAAAAGGGTTTTGATAGATATCTCATTGCATGGAAAAATTGGGATGATCCATCTTCAAGTGATTTTACTTCAGCTTTAGTTCAAACTCCTAATCCTGAAAGTTTTATTTGGAAAGGCTCAACAAAACTCTACAGAACAGGACCATGGACTGGTTCTCGATCAAGTGGAATAGTTGGATTAACAACAAATCCACTTTATGATTATGAGTTTATCAACAATGAAGATGAATTGTATTATATGTTCACACTCAAGAATAGTTCTTATATTTCTATAGTTGTTTTGAACCAAACAAGTTCCAATCGACAACGTCTCATTTGGGTTTCAGATTCCAAAAAATGGAATAATTACCTAACATTACCACAAGATACTTGTGATGATTATAATATTTGTGGAAATAATGGCCTTTGTACGCTCAATGAATCACCTATTTGTCAGTGTTTAGATGGATTTAAGCCGAAGTCGCCGCAACAGTGGAATGCAACGGATTGGAGACAAGGATGTGAGCGTAATGGCAATTGGAGTTGTAGGGTTAAACATAGAGATGGGTTTAAAAGAATTGTTGGGATGAAATTGCCAGATACTACACATTCTTGGATTGATGAGAAAATGTCACTTAAAGATTGCAAGGATAAATGTTTGAAGAATTGTTCTTGTAGTGCTTACTCAAGTTTAGAATCAACTGGAACAGGTAAAGGTTGTTCAATCTGGTTTGGTGATCTTATTGATCTTAGAGTTTCAGCAAGTGGACAAGATCTATATATTCGAACAGACTCGCCAAATATAGGTGATAAAAATGGGCAAATAAAAAAAATCGTATTGGCAGTTTCAATTCCAATTTCAGTAGTCCTTGTGATGTTATTGGCATTCACCTACATACATATAACAAAGGCAAAGTATAAAAGGAAAATAGAAAAAACCACAAGGTCAGAAGAGAAAGAAGATAAATACGAAGATTTTGAGCTTCCTATCTTTGATCAAGCTACAATACTCAAGGCAACAAATAACTTCTCTTTTGACAACAAGCTCGGTGAAGGTGGTTTTGGACCGGTATATAAGGGTACATTGCTTGATGGACAAGAAATTGCTGTCAAAAGGCTTTCGAGGAGTTCTGGTCAAGGACTTAAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCAACACCGAAATCTTGTTAAAGTTATTGGTTGTTGTATTGAAGGTGGGGAGAAAATGTTGGTCTATGAATACATGTCCAACAAAAGTCTAGATTCATTTCTTTTTGATCCATTTCAAAGTAAATTGTTAGATTGGTCCGCACGCTTTAACATTCTATTTGGAATTGCTCGGGGCCTTCTTTATCTCCATGTAGATTCAAGATTACGAATCATACACAGAGATATGAAAGTGAGTAATATTTTATTGGATGATGATATGAATCCCAAAATTTCTGATTTTGGCATGGCTAGAATGTGTGGAGGTGATCAGATTGAGGGGAGAACAGACAAAATAGTAGGCACATACGGCTATATGGCACCAGAATATGCCTTTGATGGATTGTTCTCTATTAAATCAGATGTATTTAGCTTTGGTGTATTATTGTTAGAAATTATATGTGGAAAGAAAAATAGAGCACATAGCTATCTGGAGCACGATCATAATCTTATTGGATATGCATGGAGGTTGTGGAAAGAAGGCAGGCCACTTAATTTGATCGATGATAATTTGAGCAATTCATGTATTGAATCTGAAGTTGTACGTTGCATTCAAATTGGTCTACTATGCCTACAACATCATCCCGATGATAGACCAAACATGACATCTGTGGTTGTGATGCTGAGTAGCGAAAATACATTACCAAAACCAAAGGAACCTGGTTTCTTAATTAAAAAGTTCCCAGTTGATGGAGAATCTTCTTCAACAAATGAAATAACTATTTCACTAATAGACGCTAGATAG | 2457 | 0.3508 | MNIFPTILIIANILFFFSKISSAKDTITQSQPLPDGSTLVSKDGIFELGFFNLGDSTNRYVGIWYKNTDRRVVWVANRDNPIKDNSSKLIISRNGNLVLLNQNQTLLWSTKTTTTTTKTKVAISSPIVQLLDNGNLVLKNENQDNTDENFLWQSFDYPCDTVLPGMKVGWDKKKGFDRYLIAWKNWDDPSSSDFTSALVQTPNPESFIWKGSTKLYRTGPWTGSRSSGIVGLTTNPLYDYEFINNEDELYYMFTLKNSSYISIVVLNQTSSNRQRLIWVSDSKKWNNYLTLPQDTCDDYNICGNNGLCTLNESPICQCLDGFKPKSPQQWNATDWRQGCERNGNWSCRVKHRDGFKRIVGMKLPDTTHSWIDEKMSLKDCKDKCLKNCSCSAYSSLESTGTGKGCSIWFGDLIDLRVSASGQDLYIRTDSPNIGDKNGQIKKIVLAVSIPISVVLVMLLAFTYIHITKAKYKRKIEKTTRSEEKEDKYEDFELPIFDQATILKATNNFSFDNKLGEGGFGPVYKGTLLDGQEIAVKRLSRSSGQGLKEFKNEVILCAKLQHRNLVKVIGCCIEGGEKMLVYEYMSNKSLDSFLFDPFQSKLLDWSARFNILFGIARGLLYLHVDSRLRIIHRDMKVSNILLDDDMNPKISDFGMARMCGGDQIEGRTDKIVGTYGYMAPEYAFDGLFSIKSDVFSFGVLLLEIICGKKNRAHSYLEHDHNLIGYAWRLWKEGRPLNLIDDNLSNSCIESEVVRCIQIGLLCLQHHPDDRPNMTSVVVMLSSENTLPKPKEPGFLIKKFPVDGESSSTNEITISLIDAR | 818 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g01098 | 818 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 13 | 770 | - | - | |
Trre16g01098 | 818 | Gene3D | Transferase(Phosphotransferase) domain 1 | 584 | 789 | - | - | |
Trre16g01098 | 818 | Gene3D | Hepatocyte Growth Factor | 346 | 425 | - | - | |
Trre16g01098 | 818 | ProSiteProfiles | PAN/Apple domain profile. | 347 | 429 | IPR003609 | - | |
Trre16g01098 | 818 | SMART | blect_4 | 30 | 158 | IPR001480 | - | |
Trre16g01098 | 818 | SUPERFAMILY | Protein kinase-like (PK-like) | 490 | 779 | IPR011009 | - | |
Trre16g01098 | 818 | Pfam | PAN-like domain | 347 | 415 | IPR003609 | - | |
Trre16g01098 | 818 | CDD | STKc_IRAK | 514 | 779 | - | - | |
Trre16g01098 | 818 | Gene3D | Phosphorylase Kinase; domain 1 | 467 | 583 | - | - | |
Trre16g01098 | 818 | ProSiteProfiles | EGF-like domain profile. | 292 | 328 | IPR000742 | - | |
Trre16g01098 | 818 | Pfam | Protein tyrosine and serine/threonine kinase | 509 | 778 | IPR001245 | GO:0004672|GO:0006468 | |
Trre16g01098 | 818 | Pfam | D-mannose binding lectin | 72 | 184 | IPR001480 | - | |
Trre16g01098 | 818 | SMART | ntp_6 | 350 | 428 | IPR003609 | - | |
Trre16g01098 | 818 | CDD | B_lectin | 30 | 158 | IPR001480 | - | |
Trre16g01098 | 818 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 629 | 641 | IPR008271 | GO:0004672|GO:0006468 | |
Trre16g01098 | 818 | Pfam | Domain of unknown function (DUF3403) | 780 | 818 | IPR021820 | GO:0004674 | |
Trre16g01098 | 818 | SMART | serkin_6 | 508 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g01098 | 818 | Gene3D | - | 18 | 155 | IPR036426 | - | |
Trre16g01098 | 818 | ProSiteProfiles | Bulb-type lectin domain profile. | 24 | 151 | IPR001480 | - | |
Trre16g01098 | 818 | CDD | PAN_AP_plant | 339 | 428 | - | - | |
Trre16g01098 | 818 | PIRSF | SRK | 1 | 818 | IPR024171 | GO:0004674 | |
Trre16g01098 | 818 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 | 473 | 583 | - | - | |
Trre16g01098 | 818 | Pfam | S-locus glycoprotein domain | 216 | 326 | IPR000858 | GO:0048544 | |
Trre16g01098 | 818 | ProSiteProfiles | Protein kinase domain profile. | 508 | 785 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g01098 | 818 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 20 | 155 | - | - | |
Trre16g01098 | 818 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 72 | 189 | IPR036426 | - | |
Trre16g01098 | 818 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 584 | 787 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g01098 | Trre-Chr16 | 8722049 | 8725697 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g01098 | 429 | 811 | Receptor kinase-like Gene Family | AT4G23190 | 48.329 | 1.27e-124 | 385 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre16g01098 | PK_Tyr_Ser-Thr | 2.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g01098 | - | - | tpra:123915292 | 1300.03 |