Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01074 ATGGGAAACAGTGAAGATGGGAAATCAATTAAGATTGAAAAGCCTTCTTCACCTGTAACAACTGACCAGATCAATCAAACCAACCAACCTAATAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCAAAGAGTCAACATTCCACCATACTTCAACTCAACTGTTGCTTCTGGTCATGCTCCTCACCCATACATGTGGGGACCGCCACAGCCTATGGTTCATCCATATGGGCCGCCTTATGCATCATTTTATCCACATGGAGGGGTTTATACTCACCCTTCGGTTGCCGTTGCTGGGACTCCTTCAAGCATAGAGACACCAACCAAATCATCTGGAAACACTGATCAGGGTTTAGTGAAAAAAATGAAAGGATTTGATGGACTTGTAATGTCAATAGGCAACGGCAATGCTGAGAGTGCTGAGCGTGGAGCGGAAAACAGGCTATCACGGAGTTTGGATACTGAGGGTTCCAGCGATGGAAGTGATGGCAACACTACTGGGACCAATGGAACGAGGAAAAGGAGCCGGGATGGAACACCAACAACCACTGATGGAGAAGGGAAAACTGAGATTCAAGATACTCCAGTTTCCAAAGACACCACAGCTTCCAAAAAGGCGGTGATAGTTACTCCAACAAGTGTTGCAGAAAAATTTGTTGGGCCTGTACCTTCTTCAGGTATGACTACAGCACCGGAGCTGAGGAACCCTTCGACTGTTTCCACTGGTGCTGCACAACCTTTTGGAGTTTTGCCTCCTGAAGCTTGGATGCAGAATGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCTGAAGCTGAAGAACTGGCACGAAGAGTTGATGCATTGACTTCTGAGAATTTGTTGCTGAAATCAGAAATGAATGAATTGGCTCAAAATTCGGAGAAACTGAAGATGGAAAATGCTGCATTAAAGGAAAAGCTGAAAAGCACTCAACTGGGACAAACAGAAGAGATAATTTTGAACAACGTTGACAAGAGGGTTACACCTGTAAGTACAGAAAACTTACTATCAAGGGTTAATAATTCGAATTCTGATGATAGAACTGCAGAAGAAGAGAATGGTTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTTGATACAAATCCTAGAGCTAATGCTGTTGCAGCTAGTTGA 1227 0.4442 MGNSEDGKSIKIEKPSSPVTTDQINQTNQPNNIHVYPDWAAMQAYYGQRVNIPPYFNSTVASGHAPHPYMWGPPQPMVHPYGPPYASFYPHGGVYTHPSVAVAGTPSSIETPTKSSGNTDQGLVKKMKGFDGLVMSIGNGNAESAERGAENRLSRSLDTEGSSDGSDGNTTGTNGTRKRSRDGTPTTTDGEGKTEIQDTPVSKDTTASKKAVIVTPTSVAEKFVGPVPSSGMTTAPELRNPSTVSTGAAQPFGVLPPEAWMQNERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTSENLLLKSEMNELAQNSEKLKMENAALKEKLKSTQLGQTEEIILNNVDKRVTPVSTENLLSRVNNSNSDDRTAEEENGFCENKPNSGAKLHQLLDTNPRANAVAAS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01074 408 Gene3D - 267 321 - -
Trre16g01074 408 MobiDBLite consensus disorder prediction 262 293 - -
Trre16g01074 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 266 329 IPR004827 GO:0003700|GO:0006355
Trre16g01074 408 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 371 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trre16g01074 408 SMART brlzneu 264 328 IPR004827 GO:0003700|GO:0006355
Trre16g01074 408 CDD bZIP_plant_GBF1 269 317 IPR045314 GO:0003700|GO:0006355
Trre16g01074 408 MobiDBLite consensus disorder prediction 233 249 - -
Trre16g01074 408 MobiDBLite consensus disorder prediction 14 30 - -
Trre16g01074 408 MobiDBLite consensus disorder prediction 360 408 - -
Trre16g01074 408 SUPERFAMILY Leucine zipper domain 267 323 IPR046347 GO:0003700|GO:0006355
Trre16g01074 408 Coils Coil 277 332 - -
Trre16g01074 408 MobiDBLite consensus disorder prediction 189 213 - -
Trre16g01074 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 271 286 IPR004827 GO:0003700|GO:0006355
Trre16g01074 408 SUPERFAMILY BLRF2-like 311 377 - -
Trre16g01074 408 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Trre16g01074 408 MobiDBLite consensus disorder prediction 139 293 - -
Trre16g01074 408 MobiDBLite consensus disorder prediction 155 181 - -
Trre16g01074 408 MobiDBLite consensus disorder prediction 1 30 - -
Trre16g01074 408 Pfam bZIP transcription factor 264 326 IPR004827 GO:0003700|GO:0006355
Trre16g01074 408 Pfam Disordered region downstream of MFMR 120 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01074 Trre-Chr16 8522718 8526651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01074 1 407 bZIP Transcription Factor Family AT2G46270 48.009 9.33e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre16g01074 MFMR_assoc 3.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01074 K09060 - gmx:778133 587.8