Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g01052 | ATGTGCAGTTTCTATTTCTTCTTCATCTTCTCCATCATCTTCTTCTTCTTTTCACCATTAACATTATCTTTGGAACCAAGAAGGTTCCTTCATCAACCTTTTGAATCTCCAAACTCACTCTCACCTTCTCAATCTCCAAACCCATCTCCACCATCATCACCAAATCCAAAACTACCATTTTCCACAACTACCCCTAACACTTCTTCTTCTTCTTCATCATCATCAAATACACCCCCTTTTTTCCCAACATACCCTTCACCCCCACCGCCACCTTCACCTTCTTCTTTCGCTTCATTCCCTGCTAACATATCTTCTCTTATTCTTCCTCAATCCTCTAAACCCAAATCTTCTTCTTCCAAACTCCTCGCCGTCGCCATTACCGCCGTTATCGCCGCCGTGGTTGTTGCTTCCATTTCAGCTTTCATTTACTGTCGCAGAAAAAGAAAAAGCTTCTCTAATGATGATAAAACACTCAGATCCGATAGTAGTATTCGTCTTTTTCCACGGGAAGGTGGTGGCGCAACCGGCGCCGCCACCGTGAAGTCGAGGAATGTTTCTTCTACTAGCTCAGAGTTTCTTTATCTTGGTACCATTGCTAACTCTCGTGGTGATGATCTATCTAATGGTGGCGGTGGTGGTGTTGGTGGTCGGAATCCTAGAAAAATGGACTCGCCGGAGCTTCAACCGTTACCGCCACTTGCGCGACAAGGTTCGTTATCGCGGTTTTACGATGCAGGTGTGAATGTTGGTGAAGATGAAGAAGAAGAGTTTTATTCACCGAGAGGTTCTTTGAACGGAATTGGATCGGGTTCACGGAGAGTTTTCGCCGGAATTTCAGCTGAGAATTTGGTGGGTCGAAGTAGTAGTGAATCTACTTCATCTTCTTCTTATTCATCTTCTTCTGCTTCACCGGATCGTTCTCATTCGATTAGTCTTTCGCCACCGGTTAGTTTAAGTCCAAGAAGATCACAGTCAAAGTCGCCGGAAAATGTACAAACACCGCCACCGACACAGCCATTACTTGGCACCGACGGTGGAAGAAGCTCTTTGTCTTCATCAACAGTTTCTTCTCCACGAGCTTCTTCAAACTTGAACGTGAAGTCTTCTTGTTCAATGTCTTCTACGCCGGAGAAAATCTTCGCCGGAGAATGTCAATCACCGTCTTTATCACCTTTGAATCTTTCACCGACGAAAAACTTAGATGGGTCTTTTGTTAAAGTTGAAAAGACTCAATCTTGTAATGAAGATGGTTCTTCTCCGAGATTATCTAATGCTTCTAGTGGTAAATCTTCTTCTTCAGCGTTTACTTTACCGTCGCCGGAGAAAATGACAATGATGCAAGATCATAGCAATCATGGTTTGGATCAATCTCCAACTATTTCAGATGTTTCAGATCGGTTTAGACATTCTCCTTTGTCATCATTACCTCTTTCCCCGACGCTTTTATCATCGCCGGAGAGAGAGATGAACACAATGAACATGATGAACACGATGAATATGATGAACACTCAACCACCACCACCGCCGCCGCCACCACCTACTAGGAAGCATTGGGAGATTCCTGACCTTTTAACACCAATTGTTGAATCACCAACTGTTTTGATTCAACAAGGTGTTGTTTCTCAAAGAAAACAATGGGAAATTCCGGTTCTTTCAACACCAATTGCACCTTCTATTAGTGTTTCAGCAGCTCCTCCACCGCCGCCTCCACCACCACCGGCAATGCCGATGAGGCAAAGGAAGCAATGGGAAGTACCTTCTCCAACAACTCCTGTCGGTCAACCGGTTGTTTCTAGGCCACCGGAATTGAAACCTCCTTCAGGGCCTTTTGTGTTGCAAACCCCTCCAAATACATTGGTTTCTCCTGTTGAATTGCCACCAAGTTTTGAGGAGAATGCTGAAGAGGTTTCTAAACCAAAGTTGAAACCTTTGCATTGGGATAAAGTGAGGGCTAGTTCCGATCGTGAAATGGTTTGGGATCATTTGAGATCCAGCTCATTTAAGTTGAATGAGGAAATGATAGAAACATTGTTTGTGGTGAACACACCAAATCCAAAACCAAAAGATGCTACGCCACGTTCCGTTCTTACACCTCAACATCATGAGGATAGGGTATTGGATCCTAAAAAGTCACAAAATATTGCTATCTTGCTTCGAGCGGTTAATGTTACGGTAGAGGAAGTGTGTGAAGCATTGTTAGAAGGTGTTACTGATACACTTGGAACCGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAGCGTAAATTGAAGGAACATAAAGACGACTCTCCAAACAAACTCGGTCATGCTGAGAAATTTTTGAAGGCAGTTCTCGATGTACCTTTCGCATTTAAAAGGGTGGAAGCTATGCTTTACATAGCCAATTTTGAGTCTGAAGTGGAGTATCTTCGTAAATCGTTTCAAACTCTAGAGGTTGCATGTGAAGAGCTACGAAACAGTAGAATGTTCTTGAAGCTTCTAGAAGCTGTGCTCAAAACTGGAAACCGCATGAACGTTGGAACAAACCGAGGTGATGCACATGCATTCAAGCTCGATACACTTCTCAAGCTGGTTGATGTCAAAGGTGCAGACGGAAAAACAACTCTTTTACACTTTGTTGTACAAGAAATCATTAGAACCGAAGGAGCTCGTCATTCGGACACTACTACTAATCAAACACCGGCAACAATATTGAGTGACGACGCCAAGTGTAGAAGACTCGGCCTTCAAGTAGTATCTAGTCTAAGTTCCGATCTAGCCAATGTGAAGAAAGCCGCAGCAATGGACTCCGAAGTTCTCACAAGCGAAGTCTCTAAACTATCAAAAGGAATCACACACATTGCCGAGATCGTGAAATTGAATCAAACAGCAGGATCAGACGAAACCGTTAAAAAATTCACAGAATCAATGAACAAGTTCATGAGAATGGCTGAGGAGGAGATTGTTAGAATTCAAGCACAAGAAAGTGTTGCTTTATCACTTGTGAAGGAGATCACAGAGTATTTTCATGGAAACTTGTCTAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTTTTAACAGTTCTTGATAGAGTATGCAGAGAAGTTGGTAATATAAATGAAAAGACCATGATTAGTTCAGCTCATAGATTTCCAGTTCCAGTGAACCCTATGCTTCCACAACCACTTCCCGGATTACATGGACGGAGAAATTACAGCTCCTCAGACGACGATAGTTCGTCTCCTTAG | 3258 | 0.4291 | MCSFYFFFIFSIIFFFFSPLTLSLEPRRFLHQPFESPNSLSPSQSPNPSPPSSPNPKLPFSTTTPNTSSSSSSSSNTPPFFPTYPSPPPPPSPSSFASFPANISSLILPQSSKPKSSSSKLLAVAITAVIAAVVVASISAFIYCRRKRKSFSNDDKTLRSDSSIRLFPREGGGATGAATVKSRNVSSTSSEFLYLGTIANSRGDDLSNGGGGGVGGRNPRKMDSPELQPLPPLARQGSLSRFYDAGVNVGEDEEEEFYSPRGSLNGIGSGSRRVFAGISAENLVGRSSSESTSSSSYSSSSASPDRSHSISLSPPVSLSPRRSQSKSPENVQTPPPTQPLLGTDGGRSSLSSSTVSSPRASSNLNVKSSCSMSSTPEKIFAGECQSPSLSPLNLSPTKNLDGSFVKVEKTQSCNEDGSSPRLSNASSGKSSSSAFTLPSPEKMTMMQDHSNHGLDQSPTISDVSDRFRHSPLSSLPLSPTLLSSPEREMNTMNMMNTMNMMNTQPPPPPPPPPTRKHWEIPDLLTPIVESPTVLIQQGVVSQRKQWEIPVLSTPIAPSISVSAAPPPPPPPPPAMPMRQRKQWEVPSPTTPVGQPVVSRPPELKPPSGPFVLQTPPNTLVSPVELPPSFEENAEEVSKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFVVNTPNPKPKDATPRSVLTPQHHEDRVLDPKKSQNIAILLRAVNVTVEEVCEALLEGVTDTLGTELLESLLKMAPSKEEERKLKEHKDDSPNKLGHAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARHSDTTTNQTPATILSDDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLTSEVSKLSKGITHIAEIVKLNQTAGSDETVKKFTESMNKFMRMAEEEIVRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCREVGNINEKTMISSAHRFPVPVNPMLPQPLPGLHGRRNYSSSDDDSSSP | 1085 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g01052 | 1085 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 631 | 1058 | IPR015425 | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 43 | 58 | - | - | |
Trre16g01052 | 1085 | SMART | it6_source | 631 | 1047 | IPR015425 | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 285 | 372 | - | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 1062 | 1085 | - | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 561 | 595 | - | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 59 | 79 | - | - | |
Trre16g01052 | 1085 | Gene3D | Formin, FH2 domain | 628 | 1042 | IPR042201 | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 35 | 93 | - | - | |
Trre16g01052 | 1085 | PANTHER | FORMIN-RELATED | 373 | 1079 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Trre16g01052 | 1085 | Pfam | Formin Homology 2 Domain | 636 | 1032 | IPR015425 | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 409 | 486 | - | - | |
Trre16g01052 | 1085 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 565 | 1045 | - | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 561 | 577 | - | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 204 | 238 | - | - | |
Trre16g01052 | 1085 | MobiDBLite | consensus disorder prediction | 681 | 705 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g01052 | Trre-Chr16 | 8399798 | 8404035 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g01052 | 76 | 338 | FH2 protein (formin) Gene Family | AT3G25500 | 44.803 | 3.54e-26 | 114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g01052 | - | - | gmx:100802678 | 1205.66 |