Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01037 ATGCAGGAACCACCTATCATAGCAAAGAGAGGTATATTCATAAATGGAATCAATGAGCAATGGATACAGTGTGATGAGTGCTCAAAGTGGATGAAGTTGAGATCTATGGAGAATTTATGGAATCAAAGAATAATGAATGAGCAATGGATACAGTGTGATGAGTGCTCAAAATGGATGAAGTTGAGATCTATGGAGAATTTATGGAATCAAAGAATGTGTTCATGTTCTGTTCCCAAGAATTGA 243 0.3621 MQEPPIIAKRGIFINGINEQWIQCDECSKWMKLRSMENLWNQRIMNEQWIQCDECSKWMKLRSMENLWNQRMCSCSVPKN 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01037 80 ProSiteProfiles Zinc finger CW-type profile. 15 80 IPR011124 GO:0008270
Trre16g01037 80 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 2 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01037 Trre-Chr16 8269203 8270100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01037 3 33 B3 DNA Binding Superfamily AT4G32010 50.000 6.51e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01037 K09287 - psat:127130998 74.3294