Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01033 ATGGAGGCCCTCAATTCTACTGTTTTCACCCCCCTTTCTGTGCTTTCTGACAGAACAAAATTTTCATCACACTCACACCCAACAATTTCTACATGCAAAGTTTCAAACTTTTCCACTTCAATCAACAGAAAACAGAACTTAAGAGAGTTTTTATCAAAGAATTTTCAGAATGGTCTATTCCTAGCTACAGCTTCAGTTGTGAATGTTAACAATGGTGAATTTGCAAATGCTCTAACATATGAAGAAGCATTAGGACAATCTCCAAGTGCTTCTTCTGGTGGTGACATTGATCTTAATGGTTTTGTAGATAGTGTCATAGGTTTTGCAACTGAGAACCCTTTAATTCTTGCTGGTGGTGTAGCTATTTTGGCAGTTCCATTGGTTTTGTCTCAGATTTTGAAGAAACCTAAGCCTTGGGGTGTTGAATCTGCAAAAAATGCTTATGCTAAATTAGGTGCTGATGGGAATGCTCAGTTGCTTGATATAAGAGGTTTGGCTGAGATTAGGCAAGTTGGTGGCCCAAATGTTGGTGGTTTGAAGAAGAAATCGGTGTCGATCGTTTATAAAGGTGATGATAAGCCGGGGTTTTTGAAGAAGATTTCCTTGAAGTTTAAGGAACCTGAGAATACTACATTGTTCATCCTTGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAATTAGTCACCCTTAACGGATTTAAATCTGCTTATGCAATTAAGGATGGTGCGGAAGGACCACAAGGATGGCTGAATAGTGGCCTTCCTTGGATTGAACCAAAGAAAGCATTGAGCTTGGATTTTGGCAGTTTGACAGATACTATCAATGAAGTAATCGGAGAATCTGATGGCTTGGCTGTTACTCTTGGGATTGCTGCAGCTACTGGAATTGGTGCATTAGCTTTTTCTGAGGTAGAAACAATTCTCCAACTTGTAGGATCAGCTGCAATTGTTCAGTTTGCAAGTAAGAAGCTTCTATTTGCTGAGGACCGGAAGAAAACACTAAAACAAGTTGAGGATTTCTTGAACACCAAGGTTGCTCCTAAGGAGCTTGTTGATGAAATAAAGGACATTGGAAAGGCTCTTCTACCAACTTCCACTAGCGATAAGGCTCTTCCCACACCAACGGAAAATATTCCAGAGCTCGCTACAGCTGGTGGCACTGTACAGAAAACAGAAGCTACTCCTGAAACTGTATCCGAGATCAAAGCAGAAGCAGCAGTAGAACCTGTGATCAAAGTAGAAGCAGCTGCAGAACCTGAGCCCAAAGTAGAAGCAGCAGCAGAACCTGCTCCGGAAATACACTCCGTGCCAAACACTGAAGCTGAGGCAAAGTCAATTCCTGTGCAATCTAGACCACTTTCTCCATACCCATATGTAATGTCTTAA 1389 0.4132 MEALNSTVFTPLSVLSDRTKFSSHSHPTISTCKVSNFSTSINRKQNLREFLSKNFQNGLFLATASVVNVNNGEFANALTYEEALGQSPSASSGGDIDLNGFVDSVIGFATENPLILAGGVAILAVPLVLSQILKKPKPWGVESAKNAYAKLGADGNAQLLDIRGLAEIRQVGGPNVGGLKKKSVSIVYKGDDKPGFLKKISLKFKEPENTTLFILDKFDGNSELVAELVTLNGFKSAYAIKDGAEGPQGWLNSGLPWIEPKKALSLDFGSLTDTINEVIGESDGLAVTLGIAAATGIGALAFSEVETILQLVGSAAIVQFASKKLLFAEDRKKTLKQVEDFLNTKVAPKELVDEIKDIGKALLPTSTSDKALPTPTENIPELATAGGTVQKTEATPETVSEIKAEAAVEPVIKVEAAAEPEPKVEAAAEPAPEIHSVPNTEAEAKSIPVQSRPLSPYPYVMS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01033 462 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 459 IPR044240 -
Trre16g01033 462 MobiDBLite consensus disorder prediction 419 462 - -
Trre16g01033 462 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 137 268 - -
Trre16g01033 462 Gene3D - 139 269 IPR036873 -
Trre16g01033 462 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 139 259 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01033 Trre-Chr16 8227907 8231397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01033 1 457 Sulfurtransferasese or Rhodanese AT4G01050 59.395 2.07e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01033 K17525 - gmx:100784482 561.992