Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01032 ATGGAGGCCCTCAATTCTACTGTTTTCACCCCCCTTTCTGTGCTTTCTGACAGAACAAAATTTTCATCACACTCACACCCAACAATTTCTACATGCAAAGTTTCAAACTTTTCCACTTCAATCAACAGAAAACAGAACTTAAGAGAGTTTTTATCAAAGAATTTTCAGAATGGTCTATTCCTAGCTACAGCTTCAGTTGTGAATGTTAACAATGGTGAATTTGCAAATGCTCTAACATATGAAGAAGCATTAGGACAATCTCCAAGTGCTTCTTCTGGTGGTGACATTGATCTTAATGGTTTTGTAGATAGTGTCATAGGTTTTGCAACTGAGAACCCTTTAATTCTTGCTGGTGGTGTAGCTATTTTGGCAGTTCCATTGGTTTTGTCTCAGATTTTGAAGAAACCTAAGCCTTGGGGTGTTGAATCTGCAAAAAATGCTTATGCTAAATTAGGTGCTGATGGGAATGCTCAGTTGCTTGATATAAGAGGTTTGGCTGAGATTAGGCAAGTTGGTGGCCCAAATGTTGGTGGTTTGAAGAAGAAATCGGTGTCGATCGTTTATAAAGGTGATGATAAGCCGGGGTTTTTGAAGAAGATTTCCTTGAAGTTTAAGGAACCTGAGAATACTACATTGTTCATCCTTGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAATTAGTCACCCTTAACGGATTTAAATCTGCTTATGCAATTAAGGATGGTGCGGAAGGACCACAAGGATGGCTGAATAGTGGCCTTCCTTGGATTGAACCAAAGAAAGCATTGAGCTTGGATTTTGGCAGTTTGACAGATACTATCAATGAAGTAATCGGAGAATCTGATGGCTTGGCTGTTACTCTTGGGATTGCTGCAGCTACTGGAATTGGTGCATTAGCTTTTTCTGAGGTAGAAACAATTCTCCAACTTGTAGGATCAGCTGCAATTGTTCAGTTTGCAAGTAAGAAGCTTCTATTTGCTGAGGACCGGAAGAAAACACTAAAACAAGTTGAGGATTTCTTGAACACCAAGGTTGCTCCTAAGGAGCTTGTTGATGAAATAAAGGACATTGGAAAGGCTCTTCTACCAACTTCCACTAGCGATAAGGCTCTTCCCACACCAACGGAAAATATTCCAGAGCTCGCTACAGCTGGTGGCACTGTACAGAAAACAGAAGCTACTCCTGAAACTGTATCCGAGATCAAAGCAGAAGCAGCAGTAGAACCTGTGATCAAAGTAGAAGCAGCTGCAGAACCTGAGCCCAAAGTAGAAGCAGCAGCAGAACCTGCTCCGGAAATACACTCCGTGCCAAACACTGAAGCTGAGGCAAAGTCAATTCCTGTGCAATCTAGACCACTTTCTCCATACCCATATTATCCAGATTTCAAACCTCCATCATCTCCATCTCCTTCAAAGCCCTAG 1425 0.4154 MEALNSTVFTPLSVLSDRTKFSSHSHPTISTCKVSNFSTSINRKQNLREFLSKNFQNGLFLATASVVNVNNGEFANALTYEEALGQSPSASSGGDIDLNGFVDSVIGFATENPLILAGGVAILAVPLVLSQILKKPKPWGVESAKNAYAKLGADGNAQLLDIRGLAEIRQVGGPNVGGLKKKSVSIVYKGDDKPGFLKKISLKFKEPENTTLFILDKFDGNSELVAELVTLNGFKSAYAIKDGAEGPQGWLNSGLPWIEPKKALSLDFGSLTDTINEVIGESDGLAVTLGIAAATGIGALAFSEVETILQLVGSAAIVQFASKKLLFAEDRKKTLKQVEDFLNTKVAPKELVDEIKDIGKALLPTSTSDKALPTPTENIPELATAGGTVQKTEATPETVSEIKAEAAVEPVIKVEAAAEPEPKVEAAAEPAPEIHSVPNTEAEAKSIPVQSRPLSPYPYYPDFKPPSSPSPSKP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01032 474 Gene3D - 139 269 IPR036873 -
Trre16g01032 474 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 474 IPR044240 -
Trre16g01032 474 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 137 268 - -
Trre16g01032 474 MobiDBLite consensus disorder prediction 454 474 - -
Trre16g01032 474 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 139 259 IPR036873 -
Trre16g01032 474 MobiDBLite consensus disorder prediction 417 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01032 Trre-Chr16 8227907 8232156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01032 1 464 Sulfurtransferasese or Rhodanese AT4G01050 59.149 3.22e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01032 K17525 - gmx:100784482 549.666