Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01018 ATGAAATCTATTTTACCTGCAAATCAGAATGATGATGAGAATGAAGAATCAATTTGGTCTTCATATGATTCCTGGCTAGAAAAGTATCCTTCAGCATTGGAAAATTTTGAAAAAGTGATGAACATTGGAAAAGAGAAAAAAATTGTTGTGTTCTTAGATTATGATGGAACACTCTCTCAAATCGTAGATGATCCAGATAAAGCTTACATGACCGATGCCATGCGTGCGGCCGTCCGCGAAGTTGCTAGTTATTTTCCTACTGCCATTGTTAGTGGAAGGTCTAGGAATAAGGTTTATGATTTTGTGAAATTGAAAAATGTTCATTATGCTGGGAGTCATGGAATGGATATATCAACTCCACAAGGGTCATCCAAGTATCAAGATAAGAAGCATCAACAAAAGGCTGTTGATGAAAAGGGTAATGAAGCTGTTCTTTTTCATCCAGCAAAAGAATTTTTGCCAACAATCCAAGAGATTGGTAAGATTTTGAAAGAAAATATAACAATAATAAAGGGCTCTACTATTGAAGACAATAAGTTTTGTGTCACGGTACATTACCGTCGTGTGAAAAATGAAAAGGATGTTGAAGTTCTCAAAGAAATTGTTGAATCAATTATGAAAGATTACCCTAATTTTCACATTTCTGGAGGAAAAAAGGTTTTGGAGATACGCCCAAATGTGAAATGGAATAAAGGTCATGCTCTAATGTATTTGCTTGACACTCTTGGATTTGATAACTTTGATGATGTTTTACCAATGTACATTGGGGATGATAGGACTGATGAAGATGCTTTCAAGGTGATAAGACAAATTGGAGGAGGTTTTCCAATTATTGTTTCTTCAATTGCTAGGGAGACAAATGCTTCATATTCTCTGCGTGACCCTGCTGAAGTTATGACTTTTTTGATTCATTTAGCAAAATGGAAGAAGAACTTGATGAAGAAAACTAAAGAGAGGAAATGA 963 0.351 MKSILPANQNDDENEESIWSSYDSWLEKYPSALENFEKVMNIGKEKKIVVFLDYDGTLSQIVDDPDKAYMTDAMRAAVREVASYFPTAIVSGRSRNKVYDFVKLKNVHYAGSHGMDISTPQGSSKYQDKKHQQKAVDEKGNEAVLFHPAKEFLPTIQEIGKILKENITIIKGSTIEDNKFCVTVHYRRVKNEKDVEVLKEIVESIMKDYPNFHISGGKKVLEIRPNVKWNKGHALMYLLDTLGFDNFDDVLPMYIGDDRTDEDAFKVIRQIGGGFPIIVSSIARETNASYSLRDPAEVMTFLIHLAKWKKNLMKKTKERK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01018 320 SUPERFAMILY HAD-like 49 311 IPR036412 -
Trre16g01018 320 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 5 315 IPR044651 GO:0004805|GO:0005992
Trre16g01018 320 FunFam Trehalose 6-phosphate phosphatase 155 315 - -
Trre16g01018 320 Pfam Trehalose-phosphatase 51 295 IPR003337 GO:0003824|GO:0005992
Trre16g01018 320 Gene3D - 161 320 IPR023214 -
Trre16g01018 320 Gene3D - 48 146 IPR023214 -
Trre16g01018 320 NCBIfam HAD-IIB family hydrolase 50 270 IPR006379 -
Trre16g01018 320 NCBIfam trehalose-phosphatase 46 306 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01018 Trre-Chr16 8128842 8131388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01018 46 306 Trehalose Biosynthesis Gene Families AT1G23870 24.364 2.90e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01018 K01087 - cam:101508225 486.878