Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01017 ATGTTGGTAGCAGAATTTCAACAATCAACCATCAACTCAAACATGAAATCTATTTTACCTGCAAATCAGAATGATGATGAGAATGAAGAATCAATTTGGTCTTCATATGATTCCTGGCTAGAAAAGTATCCTTCAGCATTGGAAAATTTTGAAAAAGTGATGAACATTGGAAAAGAGAAAAAAATTGTTGTGTTCTTAGATTATGATGGAACACTCTCTCAAATCGTAGATGATCCAGATAAAGCTTACATGACCGATGCCATGCGTGCGGCCGTCCGCGAAGTTGCTAGTTATTTTCCTACTGCCATTGTTAGTGGAAGGTCTAGGAATAAGGTTTATGATTTTGTGAAATTGAAAAATGTTCATTATGCTGGGAGTCATGGAATGGATATATCAACTCCACAAGGGTCATCCAAGTATCAAGATAAGAAGCATCAACAAAAGGCTGTTGATGAAAAGGGTAATGAAGCTGTTCTTTTTCATCCAGCAAAAGAATTTTTGCCAACAATCCAAGAGATTGGTAAGATTTTGAAAGAAAATATAACAATAATAAAGGGCTCTACTATTGAAGACAATAAGTTTTGTGTCACGGTACATTACCGTCGTGTGAAAAATGAAAAGGATGTTGAAGTTCTCAAAGAAATTGTTGAATCAATTATGAAAGATTACCCTAATTTTCACATTTCTGGAGGAAAAAAGGTTTTGGAGATACGCCCAAATGTGAAATGGAATAAAGGTCATGCTCTAATGTATTTGCTTGACACTCTTGGATTTGATAACTTTGATGATGTTTTACCAATGTACATTGGGGATGATAGGACTGATGAAGATGCTTTCAAGGTGATAAGACAAATTGGAGGAGGTTTTCCAATTATTGTTTCTTCAATTGCTAGGGAGACAAATGCTTCATATTCTCTGCGTGACCCTGCTGAAGTTATGACTTTTTTGATTCATTTAGCAAAATGGAAGAAGAACTTGATGAAGAAAACTAAAGAGAGGAAATGA 1005 0.3512 MLVAEFQQSTINSNMKSILPANQNDDENEESIWSSYDSWLEKYPSALENFEKVMNIGKEKKIVVFLDYDGTLSQIVDDPDKAYMTDAMRAAVREVASYFPTAIVSGRSRNKVYDFVKLKNVHYAGSHGMDISTPQGSSKYQDKKHQQKAVDEKGNEAVLFHPAKEFLPTIQEIGKILKENITIIKGSTIEDNKFCVTVHYRRVKNEKDVEVLKEIVESIMKDYPNFHISGGKKVLEIRPNVKWNKGHALMYLLDTLGFDNFDDVLPMYIGDDRTDEDAFKVIRQIGGGFPIIVSSIARETNASYSLRDPAEVMTFLIHLAKWKKNLMKKTKERK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01017 334 Gene3D - 169 334 IPR023214 -
Trre16g01017 334 Gene3D - 62 160 IPR023214 -
Trre16g01017 334 FunFam Trehalose 6-phosphate phosphatase 163 240 - -
Trre16g01017 334 Pfam Trehalose-phosphatase 65 309 IPR003337 GO:0003824|GO:0005992
Trre16g01017 334 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 12 329 IPR044651 GO:0004805|GO:0005992
Trre16g01017 334 SUPERFAMILY HAD-like 63 325 IPR036412 -
Trre16g01017 334 NCBIfam trehalose-phosphatase 60 320 IPR003337 GO:0003824|GO:0005992
Trre16g01017 334 NCBIfam HAD-IIB family hydrolase 64 284 IPR006379 -
Trre16g01017 334 FunFam Trehalose 6-phosphate phosphatase 169 329 - -
Trre16g01017 334 CDD HAD_TPP 63 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01017 Trre-Chr16 8128800 8131388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01017 60 320 Trehalose Biosynthesis Gene Families AT1G23870 24.364 2.86e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01017 K01087 - cam:101508225 486.878