Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01007 ATGCCTACATGTTATGATGTGTCTGTGAGTGATCCCAATACAATATGGCAAACTGATAATATTCTTTACAAGGAGCTCCCTACTCTTGCCGTTCAATTGGCCTTTACCACAATTGTGTCTCGTTCTTTTTTCTTTATATATAAACCTTTTCATCAATCTCAGCTCATTGCACAAATCTCTGTTGGTATTTTTCTAACTCAATTCCTTTGGAAATTTAATTTTTTCGGATTCATTTTTCCTGCATCCGGGGTGATTAACATTGATGTGCTAACACATGCTGGTGTCATATACTACGCATTCTTAACTGGTTTGGAGATGAACTTGGATACAATTTTACATGTAAAAAAGAAAGCCGCAACCATTGCAATTTCGGGGTTCATCTTTCCAATGGTGATGGGACCAATTTTATACACTCTACATCGAAAGGTTTATAGCAATGGTGAGAAATACCCACTTGAAGAAAGTAATATGAATGCTTATGTACTATGGACTTTAGTTCTCACCGTGACAGGTTTTCCAGTTGTAGTTCACACACTTACTGAGCTCAAACTTCTTTATACTCGTCTTGGTAAGATTGCATTAACAACAAGTATGATCAGTGACACATATGCTTGGATTTTATTCACATTAGTTGTTCCATTTTCAATTAATGGTACAAGGGCAATATACTCAGTATTAAGCACCATAATATTTGTTTTCATTTGCATCTACGTGGTGCGTCCAATCATCGTAAAGGTCGTTGATCGCAAGACAGAAAGAGATGAATGGGATGATAACCAATTACTATTTGTTGTGATGGGAATTTTTATTTTTGCATACACAACAGATACTCTTGGCACACATGGCATTGTTGGGGCTTTTGTGTACGGGTTGATTTTACCTCATAGTAAATTTGCTGACATGGTGATATCAATGACTGATGATTTTGGTGGTGCATTTTTAGTACCACTTTACTTTAGTGGCAGTGGAATGCGGATCTCATTTAGTATTATTTTCGACCAACCAAATTGGCCTTTATCGCTTATGGTTATAATCTTGTTGTGTGTTCCGAAGATTTTAAGCACTTTGTTTGCCACTTTCTTTTTTGGCATTCATGCTCGTGATGGTTTTGCTTTAGGAATAATTCTTAATACCAAGGGTGCTGTTGCACTAATGATGCTTAATACGGCTTGGGATAAAGAGATTCTTTCTGTACCAACCTATTCTGTCTTAACCCTCGGAGTCCTTTTAATGACTATAGTGGTGCCTCCCATCATCAATATCATATACAATCCCAGGAAGCATTTTGAGCAAAACAAGCTAAAGACTATACAAAAGCTAAGGCTTGATGCAGAGCTCAGGATTTTGGCATGTGTTCACAATACTCGCCATGCTACGGGGATTACTAGCCTCATTGAATCTTTCAATGCCACCAGACTTTCACCAATACATGTTTTTTCACTTTACCTTGTTGAACTCACAGGACGTGCTGGTGCACTTGTTGCTTCTTATTTGGAGAAGCCTAGTGGCCATCTTGGAGCACAAAATCTTACAAGATCTCAGGAAGAACTTGAAAGCATTAACAATACCTTTGAAGCATTTGGAGAGGCATATGATGCCGTTAGAGTCCAAACCTTAAATGTTGTGTCAGCCTATGCAACCATTCACGAGGACATATTCAACTCAGCTAATGAAAAGCGCACTAGCTTGATTATCCTTCCATTCCACAAACAACTTGGTTCAGAAGGTGCACTAAAAACAACCAGTATTGCATACAGAGATATAAACCTGAATGTGATGGAAGGTGCACCTTGCTCTGTGGGAATCTTTGTTGATCGTGATATTGGTCCACTACCAAAAATGAATTTTTCTATTTGTATGATCTTTATTGGAGGTCCCGACGATCGTGAAGCCTTAGCCATTGCATGGAGGATGGCGGGGCACCCAGGAACCCGATTATCAGTGGTTCGAATGCTCTTGTTTGATAAAGCTGCTGAAGTAGACACTTCGAATCACGCTGAAGCACAAGGAATACTATCTCTTGTAATGGATAATGAGAAGCAAATGGATTTAGATGACGAATATGTGAATTCCTTTAGACTAATAGGAGTGCACAACAATGATTCTATATCATATTCAGAGGTTGATGTTCATTCAGATGAAGATATTTCCACAATACTCAATGAGCTAGAAATTTTTGGCTACAATTTATACATAGTTGGACAAGGGAATCGTAGGAACTCTCGATTTTTTTCAAATTTATTAGAATGGTGTGATTGTTCAGAACTTGGAGTAATAGGGGATATGTTGGCATCAGAAAATTTTGGTTTGCGCTCGTCTGTGCTAGTTGTGCAACAATATGGGTATGGAGGAATGGTTTCGGGAAAGCAATCCAATCATGTGACTTCTAATAACAATGGTTTAGAGGCAGTTGTCGTGAAGACTGAATAA 2430 0.3831 MPTCYDVSVSDPNTIWQTDNILYKELPTLAVQLAFTTIVSRSFFFIYKPFHQSQLIAQISVGIFLTQFLWKFNFFGFIFPASGVINIDVLTHAGVIYYAFLTGLEMNLDTILHVKKKAATIAISGFIFPMVMGPILYTLHRKVYSNGEKYPLEESNMNAYVLWTLVLTVTGFPVVVHTLTELKLLYTRLGKIALTTSMISDTYAWILFTLVVPFSINGTRAIYSVLSTIIFVFICIYVVRPIIVKVVDRKTERDEWDDNQLLFVVMGIFIFAYTTDTLGTHGIVGAFVYGLILPHSKFADMVISMTDDFGGAFLVPLYFSGSGMRISFSIIFDQPNWPLSLMVIILLCVPKILSTLFATFFFGIHARDGFALGIILNTKGAVALMMLNTAWDKEILSVPTYSVLTLGVLLMTIVVPPIINIIYNPRKHFEQNKLKTIQKLRLDAELRILACVHNTRHATGITSLIESFNATRLSPIHVFSLYLVELTGRAGALVASYLEKPSGHLGAQNLTRSQEELESINNTFEAFGEAYDAVRVQTLNVVSAYATIHEDIFNSANEKRTSLIILPFHKQLGSEGALKTTSIAYRDINLNVMEGAPCSVGIFVDRDIGPLPKMNFSICMIFIGGPDDREALAIAWRMAGHPGTRLSVVRMLLFDKAAEVDTSNHAEAQGILSLVMDNEKQMDLDDEYVNSFRLIGVHNNDSISYSEVDVHSDEDISTILNELEIFGYNLYIVGQGNRRNSRFFSNLLEWCDCSELGVIGDMLASENFGLRSSVLVVQQYGYGGMVSGKQSNHVTSNNNGLEAVVVKTE 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01007 809 Gene3D - 28 432 IPR038770 -
Trre16g01007 809 Pfam Sodium/hydrogen exchanger family 34 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre16g01007 809 PANTHER CATION/H + ANTIPORTER 15 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01007 Trre-Chr16 8060811 8063930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01007 4 780 Antiporter Super Family AT2G13620 36.629 6.40e-173 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01007 - - gmx:100804266 1152.89