Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00970 ATGGAGCAGGAAGTTAGAGGAAAAAGAAGACAGTTCTGGCGAGGAAGAGAGAGTTCCGGTGGAGAGAGTGGTCTCAGTTTCCGGAAAATCAGAGAATTTTTTTTGCTCTGTCAGATTCAGTCCTTCAAGAAGGAGAATCTCTCTTTGTTGTCTCAATCTCGGGATGATTATGCTGCTGATGACAATGAATACGAGGTTATGTGCAATTTAAGGTCGACGGCGATGATGAATTACATTTGGAGATACAAGCTTCAGAGAGCTTCATTGCCTGAAGCAGAGAAGAAGAAGGAACAGAGTTTACCCTTTTATCAGCTTTTCTCATTTGCTAATAAATATGATTGGATTCTTATGATCTCAGGAAGTATTGGTGCCATTATTCATGGTTCATCTATGCCTGTTTTTTTTTCTTTTTGGTCAAATGGTTAA 426 0.3944 MEQEVRGKRRQFWRGRESSGGESGLSFRKIREFFLLCQIQSFKKENLSLLSQSRDDYAADDNEYEVMCNLRSTAMMNYIWRYKLQRASLPEAEKKKEQSLPFYQLFSFANKYDWILMISGSIGAIIHGSSMPVFFSFWSNG 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00970 141 Gene3D ABC transporter type 1, transmembrane domain 95 140 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00970 Trre-Chr16 7674311 7677919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00970 91 140 Calmodulin-binding Proteins AT2G36910 40.000 1.46e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00970 K05658 - pop:7495965 90.8929