Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00934 ATGGATTCAAGAATTTGTATCAATTTTTTGTTATGTATAAGCCTTCAATTCATATTCACATTGGCTCACTCTGATAATTATATCATTCATATGAATTTATCAATGATGCCAAAAGTATTCTCAAACCAACACAATTGGTATGAATCCACTCTTTCTCAAGTTACTACTACCAACAATATTCTCAAGTCTACCTCTTCTAAAATCATTTATACATACAATAATGTTATGAATGGTTTTAGTGCAAATCTATCACCCGAAGAGCACGAAGCTCTCAAAACCTCCGCCGGTTACATTTCTTCAATGCCTGATTTACCCTTGAAACTTGACACAACACACTCACCTCAATTTCTTGGCCTTAATCCTTACAAAGGGGCATGGGCAGCTTCTGATTTTGGCAAAGATATCATTGTTGGTGTAATAGACACCGGTGTTTGGCCAGAAAGTGAAAGTTTCAATGATAATGGAATGACCAAAATACCAACAAAATGGAAAGGCCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTTTGCAACAAGAAACTCATTGGAGCTAGATTTTTCAATAGAGGGTTCTTGGCGAAATATTCAAACTTAAGTACAACAATTGTGAACACCACACGTGACACAGATGGTCATGGAACCCACACTTCAACAACAGCCGCCGGAAGTAGAGTAGAAGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCTACAGGAATAGCTTCATTGTCTAGAGTCGCCATCTACAAGGTCGTGTGGGGACCAAATAACGATGCACTGTCATCTGATGTAATAGCTGCAATTGATGTTGCCTTAGCGGACGGTGTTGATGTTCTTTCAATGTCACTAGGCTATAACAATGTGCCTTTGTATGAAGATGGTGTTGCTATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTTTCTACTTCGGCAGGTAATAACGGTCCTTCCTCTAAAACTATTCACAATGGAACACCATGGGTGATAACTATTGCTGCTGGCACTTCAGACCGCGAATTTCGTGGGAATCTTACACTTGCTAATGGAGTTTCACTCACTGGTTTTGCTTCTTATCTAGGAAACTTCTCTGCTAGTAATTTTTCAATTGTTTTCATGGGTACGTGTGATAATATTACTGAACTAATCAAAATGAAGAGAAATATTGTGGTTTGTGAAGACAATAATGGAACTCTTTCTAGCCAAGTTAATAATGTGGCTGCAGCAAACATTGTTGGAGCTGTTTTCATATCAAACGCATCACAAACTGAAATATCAAACCTCTTATGGGATCCGCTTCCATCCATCACCGTTAATCGGAAATATGGAGAAATTGTCAAAGATTACATAAAGAGTAACTCTAACTCTAGTTCAGTAGCAAAAATGTCTTTCAAGATAACATCTTTTGGTGCTAAACCAACACCTAGTGTGGATTATTATAGTTCAAGAGGGCCTTCAAAGAGTTGTCCATATGTTTTGAAACCTGACATTACAGGTCCCGGTACATCAATCTTAGCTGCATGGCCTACAAATATTCCTGTGTTGGATTTTGAGTCTGATAAACTCTTCAACAAGTTTAACTTTTTAACTGGAACATCTATGTCATGTCCTCATGTTGCTGGTGTAGGAGCACTTTTGAAAGGAGCACATGATGATTGGAGCCCTGCAGCTATTAGATCAGCAATGATGACAACATCAGACATACTTGATAATACTAAGGAACCGATCAAAGACATCGGAAAAGATAACAAAGTTGCAACTCCTCTTGCATTGGGAGCTGGTCATATCAACCCTAATAGAGCACTTGACCCGGGTCTTGTATATGATATTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAGAAAACATCACTTCCATCACAAGATCCTCTACAAATGATTGTTCGAAACCTTCCTTGGATCTTAACTACCCTTCTTTTATTGCTTTCTTCAATGCGGAAAACTCTTCTTCAAGGGTAGCACAAGAATTTAGCAGAACAGTTACCAATGTTGGTGACGAAAAAACTACTTATGTTGCAAGCATTACTCCAATTGAAGGGTTCCGTATCATTGTTATCCCGAATAAATTGGTGTTCAGTAAGAAGAACGAGAAGCAAAGCTACAAGTTGAGGATTGAAGGCTCAAGAATGACACATGAGGATGAAGTAGCTTTTGGCTACCTCACTTGGCAAAATGAGAAGCATGTGGTGAGGAGTCCTATTGTGGTAACCAGTAGCCAGTAA 2271 0.3831 MDSRICINFLLCISLQFIFTLAHSDNYIIHMNLSMMPKVFSNQHNWYESTLSQVTTTNNILKSTSSKIIYTYNNVMNGFSANLSPEEHEALKTSAGYISSMPDLPLKLDTTHSPQFLGLNPYKGAWAASDFGKDIIVGVIDTGVWPESESFNDNGMTKIPTKWKGQLCQFENTNNSSFCNKKLIGARFFNRGFLAKYSNLSTTIVNTTRDTDGHGTHTSTTAAGSRVEGASFFGYANGTATGIASLSRVAIYKVVWGPNNDALSSDVIAAIDVALADGVDVLSMSLGYNNVPLYEDGVAIATFAAMEKGVFVSTSAGNNGPSSKTIHNGTPWVITIAAGTSDREFRGNLTLANGVSLTGFASYLGNFSASNFSIVFMGTCDNITELIKMKRNIVVCEDNNGTLSSQVNNVAAANIVGAVFISNASQTEISNLLWDPLPSITVNRKYGEIVKDYIKSNSNSSSVAKMSFKITSFGAKPTPSVDYYSSRGPSKSCPYVLKPDITGPGTSILAAWPTNIPVLDFESDKLFNKFNFLTGTSMSCPHVAGVGALLKGAHDDWSPAAIRSAMMTTSDILDNTKEPIKDIGKDNKVATPLALGAGHINPNRALDPGLVYDIGVQDYVNLLCALNFTQENITSITRSSTNDCSKPSLDLNYPSFIAFFNAENSSSRVAQEFSRTVTNVGDEKTTYVASITPIEGFRIIVIPNKLVFSKKNEKQSYKLRIEGSRMTHEDEVAFGYLTWQNEKHVVRSPIVVTSSQ 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00934 756 Gene3D - 623 755 - -
Trre16g00934 756 Pfam Peptidase inhibitor I9 27 108 IPR010259 -
Trre16g00934 756 ProSiteProfiles Serine proteases, subtilase domain profile. 105 606 - -
Trre16g00934 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 752 IPR045051 -
Trre16g00934 756 FunFam Subtilisin-like protease SBT1.5 134 352 - -
Trre16g00934 756 Pfam Fibronectin type-III domain 650 752 IPR041469 -
Trre16g00934 756 CDD Peptidases_S8_3 106 571 IPR034197 -
Trre16g00934 756 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Trre16g00934 756 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Trre16g00934 756 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Trre16g00934 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Trre16g00934 756 Pfam Subtilase family 132 576 IPR000209 GO:0006508|GO:0008236
Trre16g00934 756 Gene3D Peptidase S8/S53 domain 134 619 IPR036852 GO:0004252|GO:0006508
Trre16g00934 756 CDD PA_subtilisin_like 348 459 - -
Trre16g00934 756 Gene3D - 342 474 - -
Trre16g00934 756 FunFam Subtilisin-like protease SBT1.9 17 109 - -
Trre16g00934 756 SUPERFAMILY Subtilisin-like 108 610 IPR036852 GO:0004252|GO:0006508
Trre16g00934 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00934 Trre-Chr16 7295123 7297393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00934 5 742 Subtilisin-like Serine Gene Family AT5G67090 42.629 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00934 - - gmx:100786751 927.546