Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00920 ATGACTTCCAATATTTCTCTCTATATGTGGTTCTATTATATCACAAGCCTTCACTTCATTCTCACATTGGCTCGCTCTGATAATTATATCATTCACATGGATTTATCAGTTATGCCAAAAGCATTCTTAAACCAACATAGTTGGTATGAATCTACTCTTTCTCAAATTACTCCTAACAACAATATTCTCAAGTCTACCTCATCTAAAATTATTTATACATACAACCATGTTATGAATGGTTTTAGTGCAAATCTATCACCCGAAGAGCATGAATCTCTCAAAATCTCCCATGGTTATATTTCATCAATACCAGATTTACCCTTGAAGCTTGACACAACACATTCACCTCAATTCATTGGTCTTAATCCCTATAGAGGAGCATGGCCAGCCTCTGATTTTGGCAAAGATGTCATTGTTGGTGTGATTGACACTGGTGTTTGGCCAGAAAGTGAAAGTTTCAATGATAAGGGAATGACTGAAATACCTTTAAAATGGAAAGGTCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCTAGATTCTTCAACAGAGGGTTCTTGGCAAAATATTCAAACTTAAGTACAACAATTGTGAATACAACACGTGACACAGATGGACATGGGACACACACTTCATCAACATCAGCCGGAAGTAGAGTAGAAGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCTACAGGAATAGCTTCATTGTCTAGAGTAGCCATGTACAAGGTCACGTGGGGACCAAATGGAGAGACACTATCATCTGATGTATTAGCTGCAATTGATGCCGCAATATCAGACGGTGTTGATGTTCTTTCGATATCATTAGGCTTTGATAATGTGCCTTTTTATGAAGATGCTATTGCTATAGGAACATTTGCAGCTATGGAAAAACGTGTTTTTGTGTCTACTTCAGCCGGTAATAATGGACCTTCCTATAAAACTCTACACAATGGAACACCATGGGTGATAACAGTTGCTGCAGGTACTTTAGATCGCGAGTTTCGGGGAAACCTTACACTTGGTAATGGAGTCTCACTCACTGGCTTCTCTTCTTATATTGGTAAATTCTCTTCTAGCAACTTTCCAATTGTTTACATGGGTATGTGTGACAATGTTAATGATCTAATCAAAGTGAATAACAAGATTGTGGTTTGTGAAGATAAGAATGGAACCCTTGATAGTCTTTATAAAAAACTTCATAATGTGGTTGAAGCAAAAGTTGTTGGAAGTGTTTTCATATCAAATATATCCTTATCAAATATATCCCAAACTAGATATGTTAAAACATTTTATCCGCTCCCATGCATTATTATTAACTCAAAAAATGGAGAAATTGTCAAAGATTTCATCAACAGGACCTCTGACTCTAGTTCAATAGCAAAAATGTCTTTCAAGATAACACATTTTGGTGCTAAACCAGCACCTAGTGTGGATTTCTATAGTTCAAGAGGGCCATCAAATAGTTGTCCATATGTTTTGAAACCTGACATTACAGGTCCTGGTACATCAATCTTAGCAGCATGGCCCACAAATAGTCCTTTGTTTGATTTTGGAACTTATAAAATCTTCAACAAGTTCAATTTATTAAGTGGAACATCTATGTCATGTCCTCTTGTTGCTGGTGTCGCAGCGCTTTTAAAAGGCGCACACAGTGATTGGAGCCCTGCAGCTATTCGGTCAGCAATAATGACAACTTCAGATACATTTGATAATACTAAGGATCACATCAAAGACATTGCAACAGGTAACAAAGCGACACCTTTAGCATTGGGAGCTGGTCATGTTAATCCAAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAACCTTCTTTGTGCACTTAACTTGACACAAAAAAACATCACTGCCATTACAAGATCATCGTTCAACGATTGCTCTAAACCTTCATTGGATCTCAATTACCCTTCTTTTATTGCTTTTTTCAATGCTGGAAATTCTTCAAAGACAACACAACATTTTCACAGAACAGTTACCAATGTTGGTGAAGGACAAACAACTTATGTTGCTAGCATTACTCCAATTAAACGGTTTCGAATTAGCGTTATCCCAAATAAGTTGGTGTTCACCAAGAAGAACCAGAAGTTAAGTTACAGGTTGAGCATTGAAGGTCCAAGAATGATACTAAAGAACAAAGTATCTTTTGGATATCTCACTTGGAAGGATGAGAAGCATGTAGTGAGAAGTCCTATTGTTGTAACCACCCCCAATTTCAATTTGTAG 2301 0.3694 MTSNISLYMWFYYITSLHFILTLARSDNYIIHMDLSVMPKAFLNQHSWYESTLSQITPNNNILKSTSSKIIYTYNHVMNGFSANLSPEEHESLKISHGYISSIPDLPLKLDTTHSPQFIGLNPYRGAWPASDFGKDVIVGVIDTGVWPESESFNDKGMTEIPLKWKGQLCQFENTNNSSLCNKKLIGARFFNRGFLAKYSNLSTTIVNTTRDTDGHGTHTSSTSAGSRVEGASFFGYANGTATGIASLSRVAMYKVTWGPNGETLSSDVLAAIDAAISDGVDVLSISLGFDNVPFYEDAIAIGTFAAMEKRVFVSTSAGNNGPSYKTLHNGTPWVITVAAGTLDREFRGNLTLGNGVSLTGFSSYIGKFSSSNFPIVYMGMCDNVNDLIKVNNKIVVCEDKNGTLDSLYKKLHNVVEAKVVGSVFISNISLSNISQTRYVKTFYPLPCIIINSKNGEIVKDFINRTSDSSSIAKMSFKITHFGAKPAPSVDFYSSRGPSNSCPYVLKPDITGPGTSILAAWPTNSPLFDFGTYKIFNKFNLLSGTSMSCPLVAGVAALLKGAHSDWSPAAIRSAIMTTSDTFDNTKDHIKDIATGNKATPLALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALNLTQKNITAITRSSFNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTTYVASITPIKRFRISVIPNKLVFTKKNQKLSYRLSIEGPRMILKNKVSFGYLTWKDEKHVVRSPIVVTTPNFNL 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00920 766 Pfam Peptidase inhibitor I9 29 110 IPR010259 -
Trre16g00920 766 Gene3D - 631 762 - -
Trre16g00920 766 Gene3D - 344 483 - -
Trre16g00920 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Trre16g00920 766 Pfam Fibronectin type-III domain 658 759 IPR041469 -
Trre16g00920 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 111 IPR037045 -
Trre16g00920 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 759 IPR045051 -
Trre16g00920 766 Pfam Subtilase family 134 585 IPR000209 GO:0006508|GO:0008236
Trre16g00920 766 CDD Peptidases_S8_3 108 580 IPR034197 -
Trre16g00920 766 FunFam Subtilisin-like protease SBT1.5 136 353 - -
Trre16g00920 766 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Trre16g00920 766 ProSiteProfiles Serine proteases, subtilase domain profile. 107 614 - -
Trre16g00920 766 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252|GO:0006508
Trre16g00920 766 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Trre16g00920 766 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Trre16g00920 766 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Trre16g00920 766 CDD PA_subtilisin_like 350 468 - -
Trre16g00920 766 FunFam Subtilisin-like protease SBT1.9 18 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00920 Trre-Chr16 7157936 7160236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00920 14 749 Subtilisin-like Serine Gene Family AT5G67090 44.059 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00920 - - gmx:100786751 942.184