Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00919 ATGACTCCCCATATTTCTCAATTCATGTTGTTCTCCTATATTGCAATATTCTTTCACCTCATTTTCATCACATTAGCTCAATTTGATAACTATATCATTCACATGAACATATCAGCCATGCCCAAAGTATTCTCAACTCATCACACTTGGTATCAATCAACTCTTTCCTTTGCAATAGAGAATTCTCAACTCACATCAACAAACAATCTCAACTCTCCAATTTCATCTAAGTTAATTTACACCTACACACATGCTATGAATGGTTTTAGTGCTAATTTGTCACCAAAAGAACATGAATCTCTCAAAAACTCACCTGGTTACATTTCTTCAATACTCGATTTACCCTTAAAGCTTGACACAACACACTCACCTCAATTCCTTGGTCTCAATCCAAACATAGGAGCTTGGCATGATTCAAATTTTGGTAAAGATGTCATCATTGGTTTGATTGACACAGGTGTTTGGCCAGAAAGCGAAAGCTTCAAAGATAATGGATTCACTAACATTCCTTCAAAATGGAAAGGACAATGTGAAAATAGTATTCATTTCAATTCATCACTTTGCAACAAGAAACTCATTGGTGCTAAATTCTTCAACAAAGGAATATTAGCCAAACATCCAAACATAACCTTAGGAATATTGAATTCCACACGCGACACAGAAGGTCATGGGACTCATACGTCATCAACAGCAGCTGGAAGCAGAGTTGATCACGCTTCATTCTTTGGTTATGCAAATGGAACGGCTTCCGGTATAGCTCCGAATTCACGTGTAGCAATTTATAAAGCTCTATGGGAAAATAGATTCTTATCATCTGATGTACTTGCTGCAATTGACGCCGCAATATCAGACGGTGTTGATGTTCTTTCATTATCAATTAGTGGTAATGAAGTACCTTTGTATGAAGACGCTGTAGCTATAGCAACATTTGCCGCTATGGAAAAAGGTGTTTTTGTTTCCGCTTCAGCTGGAAATAATGGACCAGACCTTAAAACAATACACAATGGATCACCTTGGGTTATAACTGTGGCTGCTGGTACTATGGATAGGGATTTTCGCGGGACTCTTGTTAAGATTTACACTATGAACAATAATGGATTCACTCATATTCATTTTCTCTCTAAACATTTTACTTTGATAACTCTTACACTTGGAAATGGTAACAAAATCACAGGATTGTCTCGCTACATAGGAACATTCCCTACACATAATGTTCCTATTGTTTTCATGGGTTTATGTGACAATATAAAAGAATTGAAAAAAGTGAAGAATAAGATTGTCGTGTGTGAAGAAACAAATGGAACTAGTATTGCTGATCAAGTCAATAATTTGGATGCAGCAAATGTTTTTGGAGCTGTTTTGATTTCAAATAACTTAAGCACATACTATTCATTGAATAGTTTTCCAACCATAATTGTTGTTCCAATAAATGGGGAAATTATCAAAGCTTACATCAAGAGTTATTACAATTCTAAGCACTCTACTTCAGTAGCAAACATGTCTTTTATGGAAACACATTTTGGTGTTAAACCATCACCTAGAGTTAGTTCTTATAGTTCAAGAGGTCCGTCAAATAGTTGTCCATTTGTGTTGAAACCTGATATTACTGCGCCCGGTACTTCGATCTTAGCTGCAAGTCCTACAAATATTCCTGTGTTGGAATTGAAGTCTAAAAAGTTTTTCAGCAAATTCAATATTAGAAGTGGAACATCTATGGCATGTCCTCATGTTGCAGGTGTAGCGGCGCTTATAAAAGGTGTACACCGTGATTGGAGCCCTGCGGCTATTCGGTCAACAATAATGACAACATCAGACATATTTGATAATACTCGGGAACAAATCAAAGACATTGGCACAGGTGACAAAGCAACACCTTTTGCATTAGGAGTTGGTCATGTTAATCCTAATAAAGCACTTGACCCTGGTCTTGTTTACGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAAATACTCACAAAGAAACATCACTACCATTACAAGATCTTCTTCCAATGATTGCTCTAAACCTTCATTGGATCTCAACTACCCTTCTTTTATTGCTTTTTTCAATGGTGGAAATTCTTCCTCAAATACAATACAAGAATTTTACAGAACAGTGACCAATGTTGATGAGGGACAAGCAATTTATGTTGCTAGAATTACTCCAATCAAAGGGTTCTATGTTAATGTTATCCCAAACAAGTTGGTGTTCAATGAGAAGAATGAGAAGTTAAGTTACAAGTTGAGGATTGAAGTTGCAAGTATGACAAAATTAAAGAAAGTGGCGTTTGGATATTTAATTTGGATGGATGTGAAACATGTTGTTAGGAGTCCAATTGTGGTCACTACTCTTAAATAA 2370 0.3612 MTPHISQFMLFSYIAIFFHLIFITLAQFDNYIIHMNISAMPKVFSTHHTWYQSTLSFAIENSQLTSTNNLNSPISSKLIYTYTHAMNGFSANLSPKEHESLKNSPGYISSILDLPLKLDTTHSPQFLGLNPNIGAWHDSNFGKDVIIGLIDTGVWPESESFKDNGFTNIPSKWKGQCENSIHFNSSLCNKKLIGAKFFNKGILAKHPNITLGILNSTRDTEGHGTHTSSTAAGSRVDHASFFGYANGTASGIAPNSRVAIYKALWENRFLSSDVLAAIDAAISDGVDVLSLSISGNEVPLYEDAVAIATFAAMEKGVFVSASAGNNGPDLKTIHNGSPWVITVAAGTMDRDFRGTLVKIYTMNNNGFTHIHFLSKHFTLITLTLGNGNKITGLSRYIGTFPTHNVPIVFMGLCDNIKELKKVKNKIVVCEETNGTSIADQVNNLDAANVFGAVLISNNLSTYYSLNSFPTIIVVPINGEIIKAYIKSYYNSKHSTSVANMSFMETHFGVKPSPRVSSYSSRGPSNSCPFVLKPDITAPGTSILAASPTNIPVLELKSKKFFSKFNIRSGTSMACPHVAGVAALIKGVHRDWSPAAIRSTIMTTSDIFDNTREQIKDIGTGDKATPFALGVGHVNPNKALDPGLVYDVGVQDYVNLLCALKYSQRNITTITRSSSNDCSKPSLDLNYPSFIAFFNGGNSSSNTIQEFYRTVTNVDEGQAIYVARITPIKGFYVNVIPNKLVFNEKNEKLSYKLRIEVASMTKLKKVAFGYLIWMDVKHVVRSPIVVTTLK 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00919 789 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Trre16g00919 789 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre16g00919 789 PRINTS Subtilisin serine protease family (S8) signature 568 584 IPR015500 -
Trre16g00919 789 Pfam Peptidase inhibitor I9 31 118 IPR010259 -
Trre16g00919 789 Pfam Subtilase family 142 631 IPR000209 GO:0006508|GO:0008236
Trre16g00919 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 119 IPR037045 -
Trre16g00919 789 ProSiteProfiles Serine proteases, subtilase domain profile. 115 639 - -
Trre16g00919 789 CDD PA_subtilisin_like 381 487 - -
Trre16g00919 789 FunFam Subtilisin-like protease SBT1.5 144 364 - -
Trre16g00919 789 CDD Peptidases_S8_3 116 605 IPR034197 -
Trre16g00919 789 Gene3D - 656 788 - -
Trre16g00919 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 569 579 IPR023828 -
Trre16g00919 789 Gene3D - 349 507 - -
Trre16g00919 789 SUPERFAMILY Subtilisin-like 118 643 IPR036852 GO:0004252|GO:0006508
Trre16g00919 789 Gene3D Peptidase S8/S53 domain 144 652 IPR036852 GO:0004252|GO:0006508
Trre16g00919 789 Pfam Fibronectin type-III domain 683 785 IPR041469 -
Trre16g00919 789 FunFam Subtilisin-like protease SBT1.9 21 119 - -
Trre16g00919 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 785 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00919 Trre-Chr16 7142628 7147228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00919 9 788 Subtilisin-like Serine Gene Family AT5G67090 43.304 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00919 - - gmx:100786751 983.015