Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00916 ATGACTCCCCATATTTCTCAATGCATATTGTTCTCTTACATAACAATATTCTTTCATACGATTTTCATCACATTAGCTCAATATGATAACTATATCATCCACATGAACTTATCAGCCATGCCTAAAGCATTTTCAAATCATCACACTTGGTATCAATCAACTCTTTCCTCTGCATTAGAGAATTCTCAACTCACAACAACCAATAATCTCGGCTCTCCAATTTCTTCTAAGTTAATTTATACCTACACACATGTCATGAATGGTTTCAGTGCTAATTTATCACCAAAAGAACATGAATCACTCAAAAATTCACCAGGCTACATTTCATCCATAAGAGATTTGAACATGAAACTAGACACAACACATTCACCTCAATTCCTTGGTCTCAATCCCAACATAGGAGCTTGGCATGATTCAAATTTCGGTAAAGATGTCATCGTTGGTTTGATTGACACAGGTGTTTGGCCAGAAAGTAAAAGCTTCAACGATTATGGATTGACAAAAATTCCTTCAAAATGGAAAGGACAATGTGAAAATAGCATTCATTTCAATTCATCACTTTGCAACAAGAAACTTATTGGTGCTAAATTCTTCAACAAAGGAATATTAGCAAAATATCCAAATGTCACCTTAGGATTAAACTCCACACGCGACACAGAAGGTCATGGGACTCACACTTCATCAACAGCAGCTGGTAGTAGAGTTGATGAAGCTTCATTCTTTGGTTATGCAGCTGGAACAGCTTCAGGTATAGCATCAAATTCGCGTGTAGCGATGTATAAAGCTATATGGGAAGGTGGACTGCTATCGTCTGATGTAATAGCTGCAATTGATGCTGCAATATCAGACGGTGTTGATGTTCTTTCATTATCGTTTGGTCTTGATGAAGTACCCTTGTATGAAGATCCTGTAGCTATAGCAACATTTGCAGCTATAGAAAAAGGTGTTTTTGTTACTACTTCAGCTGGAAATGAAGGACCAATCCTTAAAACATTACACAATGGAACACCTTGGGTTATAACTGTGGCTTCTGGAACTATGGATAGAGGTTTTCAAGGGACACTTACACTTGGAAATGGTAAAAAAATCATAGGAATTTCTCTTTATATAGGAACATTCTCTACAAATAATGTTCCTATTGTTTTCATGGGTTTATGTGACAATGTTAAGGAATTGCAAAAAGTGAAGAGAAAGATTGTTGTTTGTGAAGAGAAGAATGGAACTAGCATTTCTGATCAAGTATATTATTTGGATGCAGCAAAAGTTTTTGGAGCTGTTTTGATTTCAAATTCCTCAGAAACATACTATTCACAGAATACTTTTGCAACCATCATTGTTGATCCAATAAATGGAGAAATTGTAAAAGCTTATATCAAGAGTTATTACAGTTCTAAGCACTCTACTTCAATAGCAAGCATGTCTTTCATGAAAACAGGTTTTGGTGTTAAACCGGCACCTACTGTTGATTCTTATAGTTCAAGAGGTCCATCATTTAGTTGTCCATTTGTGTTGAAACCTGACATTACTGCGCCCGGTACTTCAATCTTAGCGGCATGGCCTACAAATGTTCCTGTGTTGGAATTGAAGTCGCACAAATTTTTCAGTGAATTCAATATTATAAGTGGAACATCCATGGCGTGTCCTCATGTTGCAGGTGTAGCGGCACTTATAAAAGGCGCACACCGTGATTGGAGCCCTGCAGCTATTCGGTCGGCAATAATGACAACATCAGACATATTAGACAACACTAAAGAATCTATCAAAGACATTGGAAATGGTAACAAAGCAGCGACACCTTTTGCGATGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTACGACGTCGGTGTACAAGATTATGTTAATCTTCTTTGTGCCCTTAAATACTCACAAAGAAACATTACTACCATTACAAGATCTTCTTCCAATGATTGCTTTAAACCTTCATTGGATCTCAACTACCCTTCTTTCATTGCTTTTTTCAATGGTGGAAATTCTTCTTCAAGTACAGTACAAGAATTTCACAGAACAGTGACCAATGTTGGTGAGGGACAAACAATTTATGTTGCTAGCATTAATCCAATTAAAGGATTCCATGTCAGTGTTATTCCAAACAAGTTGGTGTTCCATGAGAAGAATGAGAAGCTAAGCTATAAGTTGAAGATAGAAGTTGCAAGTATGACAAAATTAAAGAAAGTGGCTTTTGGATATCTAACTTGGAAGGATGTGAAGCATACTGTTAGGAGTCCAATTGTGGTCACAACCCTCAAATTGAAGTCCTAG 2301 0.3703 MTPHISQCILFSYITIFFHTIFITLAQYDNYIIHMNLSAMPKAFSNHHTWYQSTLSSALENSQLTTTNNLGSPISSKLIYTYTHVMNGFSANLSPKEHESLKNSPGYISSIRDLNMKLDTTHSPQFLGLNPNIGAWHDSNFGKDVIVGLIDTGVWPESKSFNDYGLTKIPSKWKGQCENSIHFNSSLCNKKLIGAKFFNKGILAKYPNVTLGLNSTRDTEGHGTHTSSTAAGSRVDEASFFGYAAGTASGIASNSRVAMYKAIWEGGLLSSDVIAAIDAAISDGVDVLSLSFGLDEVPLYEDPVAIATFAAIEKGVFVTTSAGNEGPILKTLHNGTPWVITVASGTMDRGFQGTLTLGNGKKIIGISLYIGTFSTNNVPIVFMGLCDNVKELQKVKRKIVVCEEKNGTSISDQVYYLDAAKVFGAVLISNSSETYYSQNTFATIIVDPINGEIVKAYIKSYYSSKHSTSIASMSFMKTGFGVKPAPTVDSYSSRGPSFSCPFVLKPDITAPGTSILAAWPTNVPVLELKSHKFFSEFNIISGTSMACPHVAGVAALIKGAHRDWSPAAIRSAIMTTSDILDNTKESIKDIGNGNKAATPFAMGAGHVNPNRALDPGLVYDVGVQDYVNLLCALKYSQRNITTITRSSSNDCFKPSLDLNYPSFIAFFNGGNSSSSTVQEFHRTVTNVGEGQTIYVASINPIKGFHVSVIPNKLVFHEKNEKLSYKLKIEVASMTKLKKVAFGYLTWKDVKHTVRSPIVVTTLKLKS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00916 766 CDD PA_subtilisin_like 354 470 - -
Trre16g00916 766 Pfam Peptidase inhibitor I9 31 118 IPR010259 -
Trre16g00916 766 Gene3D - 348 480 - -
Trre16g00916 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 759 IPR045051 -
Trre16g00916 766 ProSiteProfiles Serine proteases, subtilase domain profile. 123 613 - -
Trre16g00916 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 119 IPR037045 -
Trre16g00916 766 Gene3D Peptidase S8/S53 domain 144 626 IPR036852 GO:0004252|GO:0006508
Trre16g00916 766 Pfam Fibronectin type-III domain 657 759 IPR041469 -
Trre16g00916 766 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Trre16g00916 766 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Trre16g00916 766 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre16g00916 766 SUPERFAMILY Subtilisin-like 118 617 IPR036852 GO:0004252|GO:0006508
Trre16g00916 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Trre16g00916 766 Gene3D - 630 762 - -
Trre16g00916 766 CDD Peptidases_S8_3 117 578 IPR034197 -
Trre16g00916 766 FunFam Subtilisin-like protease SBT1.9 20 119 - -
Trre16g00916 766 FunFam Subtilisin-like protease SBT1.5 144 356 - -
Trre16g00916 766 Pfam Subtilase family 142 591 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00916 Trre-Chr16 7114553 7116853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00916 14 766 Subtilisin-like Serine Gene Family AT5G67090 45.666 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00916 - - gmx:100783026 1057.36