Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00834 ATGTCTCCATTTCCATCATCACTCATTATTCTCTTCTTCATTTCCGCCACCACACTCACATTTTCATCGCCACAAACACAAACCAAACAAACCTTCATTATCCAAATCCAACACGAATCTAAACCCTCCATTTTCCCATCTCACAAAAACTGGTACGAATCCTCACTCTCTTCAATAACAGCTTCCCCAAACACACTCATCCACACATACGACACCGTTTTTCATGGTTTCTCAGCAAAACTCACACAACAAGAAGCAACAAATCTTCAATCATTAAGCCACGTCATCACTATAATACCCGAACAGATTCGTACTCTTCACACAACTCGTTCACCTCAATTTCTCGGGTTAAAAACCGCCGACAGAACCGGGTTACTCCATGAAACTGATTTCGGGTCGGATCTTGTTATTGGAGTTATTGATACCGGAATTTGGCCGGAGAGACAGAGTTTTAACGACCGTGACCTCGGTCCGGTTCCGTCGAAATGGAAAGGACAGTGTGTTGCCGGAAAAGATTTTCCGGCGACGTCGTGTAATAGGAAGGTAATCGGAGCAAAGTACTTTTCCGGCGGGTATGAAGCTACTAACGGGAAGATGAATGAGACGAATGAGTATCGTTCGGCTAGAGATTCCGATGGACATGGAACTCACACTGCTTCAATCGCTGCCGGTAGGTATGTTTCTCCGGCGTCTACCTTAGGTTATGCTAAAGGTGTCGCCGCCGGTATGGCTCCTAAGGCTCGTTTAGCTGTTTATAAAGTTTGTTGGAACGGTGGTTGTTTTGATTCCGATATTCTCGCCGCCTTTGACGCCGCCGTGGCTGACGGTGTCGACGTGGTTTCTCTTAGTGTCGGTGGTGTTGTTGTGCCGTACCATCTCGATGTCATTGCTATTGGAGCTTTTGGTGCTTCTAATGCCGGAGTTTTTGTTTCTGCCTCCGCTGGTAACGGTGGTCCGGGAGGACTCACTGTTACCAATGTAGCTCCTTGGGTGGCAACTGTCGGTGCGGGGACAATTGACAGAGATTTTCCAGCTGATGTGAAGCTTGGAAATGGTAAGATTATACCTGGAGTTAGTATCTATGGTGGACCGGGTTTAACTCCGGGTCGGATGTACCCAATTGTGTATGCCGGTAGCAGCGGTGAACACAGTGGTGAAGGTGGTGATGGTTATTCATCTTCACTTTGTCTGGAAAATTCTTTGGATCCTAAGTTTGTAAAAGGAAAAATTGTTGTTTGTGATAGAGGTATTAATTCAAGAGGTGATAAAGGTGAAGTAGTGAAAAAAGCAGGTGGAATTGGGATGGTTTTGGCTAATGGTGTGTTTGATGGTGAAGGGTTAGTGGCCGATTGTCACGTGTTGCCAGCCACGGCGGTTGGTGCCATAGGCGGCGATGTAATCAGGAGTTACATCGCTGCACATAAGTCACTATCGGTTGGATCATTACCGACTGCGACTATTGTGTTTAAGGGAACTAGGCTTGGGGTTAGGCCAGCTCCTGTGGTGGCATCGTTTTCTGCTCGAGGGCCTAACCCTGAATCGCCTGAGATTTTGAAACCAGATGTTATAGCACCTGGTTTAAACATTCTAGCTGCTTGGCCCGATCGAGTTGGACCTTCTGGGATTCCTTCCGATCATAGAAGGACTGAATTCAACATATTGTCCGGTACATCGATGGCTTGTCCTCATGTTTCCGGTTTAGCCGCTTTGTTGAAAGCGGCTCACCCTGATTGGAGTCCAGCTGCTATCAAATCAGCTCTTATGACCACTGCGTATACTGTCGATAACAAGGGCGATCCAATGTTGGATGAGTCTAACGGAAACATTTCATCGGTGTTTGATTATGGAGCTGGACATGTTCATCCAGAAAAAGCATTGGATCCTGGTTTGGTTTATGATATTTCAGTCTATGATTATGTTGATTTTTTGTGTAACTCAAATTACACCACCAAGAATATTAAAGTGATCACAAGGAAAATTGCAGATTGTAGTGGTGCCAAAAAAGCTGGACATGCTGGTAACTTGAATTATCCAACATTATCTGCAGTTTTTCAACAATATGGTAAACATAAAATGTCTACACATTTTATTAGGACTGTGACCAATGTTGGTGACCCAAATTCAGTTTATAAAGTAACAATTAAACCACCTGAGGGAATGGTGGTAACTGTGAAGCCAGATATGTTATCTTTTAGAAGGGTTGGTCAGAAATTGAATTTTCTTGTTAGGGTACAAACTAGGGAAGTTAAGCTATCACCTGGAAGTTCTTTAGTGAAGAGTGGTTCCATAATTTGGTCTGATGGAAAACACATTGTCACAAGTCCTTTGGTTGTGACAATGCAGCAACCTCTTGATTAG 2358 0.4436 MSPFPSSLIILFFISATTLTFSSPQTQTKQTFIIQIQHESKPSIFPSHKNWYESSLSSITASPNTLIHTYDTVFHGFSAKLTQQEATNLQSLSHVITIIPEQIRTLHTTRSPQFLGLKTADRTGLLHETDFGSDLVIGVIDTGIWPERQSFNDRDLGPVPSKWKGQCVAGKDFPATSCNRKVIGAKYFSGGYEATNGKMNETNEYRSARDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWNGGCFDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAIGAFGASNAGVFVSASAGNGGPGGLTVTNVAPWVATVGAGTIDRDFPADVKLGNGKIIPGVSIYGGPGLTPGRMYPIVYAGSSGEHSGEGGDGYSSSLCLENSLDPKFVKGKIVVCDRGINSRGDKGEVVKKAGGIGMVLANGVFDGEGLVADCHVLPATAVGAIGGDVIRSYIAAHKSLSVGSLPTATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGIPSDHRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIKSALMTTAYTVDNKGDPMLDESNGNISSVFDYGAGHVHPEKALDPGLVYDISVYDYVDFLCNSNYTTKNIKVITRKIADCSGAKKAGHAGNLNYPTLSAVFQQYGKHKMSTHFIRTVTNVGDPNSVYKVTIKPPEGMVVTVKPDMLSFRRVGQKLNFLVRVQTREVKLSPGSSLVKSGSIIWSDGKHIVTSPLVVTMQQPLD 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00834 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Trre16g00834 785 Pfam Fibronectin type-III domain 674 778 IPR041469 -
Trre16g00834 785 SUPERFAMILY Subtilisin-like 106 630 IPR036852 GO:0004252|GO:0006508
Trre16g00834 785 CDD PA_subtilisin_like 346 487 - -
Trre16g00834 785 CDD Peptidases_S8_3 105 592 IPR034197 -
Trre16g00834 785 Pfam PA domain 373 460 IPR003137 -
Trre16g00834 785 ProSiteProfiles Serine proteases, subtilase domain profile. 111 626 - -
Trre16g00834 785 SUPERFAMILY PA domain 404 487 IPR046450 -
Trre16g00834 785 Gene3D Peptidase S8/S53 domain 134 639 IPR036852 GO:0004252|GO:0006508
Trre16g00834 785 FunFam subtilisin-like protease SBT1.5 340 494 - -
Trre16g00834 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 778 IPR045051 -
Trre16g00834 785 FunFam Subtilisin-like protease SBT1.5 643 781 - -
Trre16g00834 785 Gene3D - 643 781 - -
Trre16g00834 785 SUPERFAMILY Protease propeptides/inhibitors 30 105 - -
Trre16g00834 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
Trre16g00834 785 FunFam Subtilisin-like protease SBT1.5 134 350 - -
Trre16g00834 785 Pfam Peptidase inhibitor I9 31 107 IPR010259 -
Trre16g00834 785 Gene3D - 340 495 - -
Trre16g00834 785 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Trre16g00834 785 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Trre16g00834 785 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Trre16g00834 785 Pfam Subtilase family 132 607 IPR000209 GO:0006508|GO:0008236
Trre16g00834 785 FunFam Subtilisin-like protease SBT1.9 20 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00834 Trre-Chr16 6350093 6352450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00834 31 784 Subtilisin-like Serine Gene Family AT3G14240 76.658 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00834 - - gmx:100808511 1293.49