Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00820 ATGGCCAAACTTGGAAAATTAACAAAACTAAAATCAGCTATCAAAAGATGGCCATCATTAACAAAACTAAGCCGCAACAACAGCTCTGTCTCTGCCTCCTGCAAGAACCAGGAACAAGAACAAGACCTTCATGCTGTCTACGTTGGAAAGTCGCGCCGGCGTTACCTCGTAAACTCCGAAGTTATTCAACACCCTGTTTTTCAGGAGCTAGTGGACAAGTCATGTTGTAATGGTGGTTGTGATGATGGTGTTGTAGTTGTTTCTTGTGAGGTTGTTTTGTTTGAACATTTATTATGGATGCTTGAAAGTGCTGAAAGTGAGACAGCACAATTGGGGTCAATGGATGAGCTGGTTGAGTTCTACAATTGTGCATGTTGA 378 0.4206 MAKLGKLTKLKSAIKRWPSLTKLSRNNSSVSASCKNQEQEQDLHAVYVGKSRRRYLVNSEVIQHPVFQELVDKSCCNGGCDDGVVVVSCEVVLFEHLLWMLESAESETAQLGSMDELVEFYNCAC 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00820 125 PANTHER EXPRESSED PROTEIN 14 122 - -
Trre16g00820 125 Pfam Auxin responsive protein 15 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00820 Trre-Chr16 6230407 6230784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00820 3 109 Calmodulin-binding Proteins AT4G34750 27.523 6.58e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00820 - - gmx:100797158 174.096