Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00808 ATGACTATGTTGGGAACTACTATGGTTATAGGAGATGGAGTTTTCACTCCACCAATGTCAGTTATTTCTGCAGTAAGCGGTATCAGTTCTAAATTGGGTCAAGATTATGTTGTCGGTATCACTATAGTGATATTGGTCTTCCTTTTTATGGTGCAAAGATTTGGTACTGATAAAGTAGGATTTTCATTTGCTCCAATTATAACCATATGGTTTATATTAATTGGAGGAATTGGTCTTTACAACTTGTTCAAATATGATGTTGGAGTATTATGTGCTATTAATCCAAAATATATTGTCGATTACTTCCAACGCAATGGTAAAAAAGCATGGATGTCACTTGGTGGAGTATTTTTATGCATCTCAGGATGTGAAGCCATGTTTGCTGACTTGGGTCACTTCAGTGTTCGAGCCATTCAAATTAGTTTCTCTTTTATTACACTTCCAGCAATATTGGCAGCATATAGTGGACAAGCAGCATATCTCCGAAAGTTCCCTCACACTGTGTCAAATATTTTCTATGAATGCATACCGGGTCCTTTGTATTGGCCAACATTTGTTATTGCTGTTATTGCCTCCATCATAGCAAGCCAAGCAATAGTTTCAGGAGCATTTTCCATTGTATCTCAAGCTTTAAGTATGGGTTGTTTTCCAAGGGTTAAGGTTGTGCACACTTCCACTACACATGAAGGCCAAGTTTATATTCCTGCAATCAATTACATGTTCTTGTTTGCATGTATTGCTGTTACTATTCTATTCAGAACCTCACAAAAGCTTAGTAATGCATATGGGGTTGCAATAGTTTGTGATATGGCTATCACAACATTCTTAGTTTCCATTGTAATGTTGATTGTATGGAAGAAAAGCATATGGCAAGTAGCTCTATTTTCTATACCATTTGGTTGCATTGAGTTACTTTATTTATCATCACAAATGGTAAAGTTCAAAGAAGGTGGTTTTCTTCCTCTAGTATCTGCGATCATCTTCACTATGATAATGGGAATATGGTTTTATGCACAAAAAGAAAGGTACATGTTTGAACTCAAGAACAAAGTTTCCTCTGAGTATTTGATAAAATTAGTGAATGACCTAAACACGAATCGCATGCCTGGAATTGGAGTTTTGTATTCCGAGCTTGTACAAGGAATTCCTCCAATATTTCCTCACTTCATTGCTAACATACCATCGATTCATTCCGTTGCTGTGTTTGTTTCCATCAAAGCAATTCCAATAAGTAGTGTTGCATTGGAAGAGAAATTTCTCTTTCGATATGTGGAGCCGAGAGAATGCAAAATATTTCGTTGCATCGTAAGGCATGGTTACAATGATGTGATTGGAGATTCTATAGAGTTTGAGTCTCAATTGGTGCAATATCTAAAGGAATTTATCTTACAAGAAAGTAATTATATGTTTGAGCTTGAAAAAACAACAATGTGTGAACAGGCACCTAATATAGAAGAAAATGTTTTAGCTTTGTCAAATGCCTCTTTGGATTCAATTCAATCATTAGGTGCAGTTGAGGGAATTGAAAATGAAATAAAGTCTATAGATAAGGCATTGGAGAAAGGTGTGGTGTATTTGCTAGGTGAAATTGATGTAGTGGCAGATCCAAAATCATCAATTTTGAATAAGATTATTGTTAATACATATAACTTTTTGAGAAGGAATTTTCAACAAAGGGATGAGTTGATGGCTATCCCTCGCAAGAGGCTTCTCAAGGTTGGAATGACATATGAAATATGA 1740 0.3563 MTMLGTTMVIGDGVFTPPMSVISAVSGISSKLGQDYVVGITIVILVFLFMVQRFGTDKVGFSFAPIITIWFILIGGIGLYNLFKYDVGVLCAINPKYIVDYFQRNGKKAWMSLGGVFLCISGCEAMFADLGHFSVRAIQISFSFITLPAILAAYSGQAAYLRKFPHTVSNIFYECIPGPLYWPTFVIAVIASIIASQAIVSGAFSIVSQALSMGCFPRVKVVHTSTTHEGQVYIPAINYMFLFACIAVTILFRTSQKLSNAYGVAIVCDMAITTFLVSIVMLIVWKKSIWQVALFSIPFGCIELLYLSSQMVKFKEGGFLPLVSAIIFTMIMGIWFYAQKERYMFELKNKVSSEYLIKLVNDLNTNRMPGIGVLYSELVQGIPPIFPHFIANIPSIHSVAVFVSIKAIPISSVALEEKFLFRYVEPRECKIFRCIVRHGYNDVIGDSIEFESQLVQYLKEFILQESNYMFELEKTTMCEQAPNIEENVLALSNASLDSIQSLGAVEGIENEIKSIDKALEKGVVYLLGEIDVVADPKSSILNKIIVNTYNFLRRNFQQRDELMAIPRKRLLKVGMTYEI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00808 579 Pfam K+ potassium transporter 2 442 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre16g00808 579 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 578 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre16g00808 579 NCBIfam potassium uptake protein 1 579 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00808 Trre-Chr16 6160329 6163085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00808 1 579 Inorganic Solute Cotransporters AT4G13420 54.181 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00808 K03549 - gmx:100798735 798.119