Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00802 ATGGAACTCTTCTTGTTCTCACATGAACCACTCTTCATCTTCATCTTCTCCCTTATCTTCTTCCTCTATCTCTTCTACTTTCACTTCTTCACCACATCAAAAAAACACAACAACCATGGCTTCAAAATCTACCCTCTACTTGGAACCTTACCTGAATTCATACTAAACCGCCACCGCTTCCTTGACTGGACAACTCAAATCCTCCGTAACTGTCCAACTAACACCGCCGTCTTCATCCGTCCCGGCAAAATCCACGGCATAATAACAGCCAATCCAGATAACATCCAACATATTCTCAAAACAAAATTTGAAAACTATCCAAAAGGTGAAAGATTCATCAGCCTTCTTCATGATTTTCTTGGTAATGGTATCTTCAACTCCGATGGTGATCTCTGGAAACTTCAGAGAAAAACTGCCAGCTACGAATTCAACACAAAATCGCTACGAAATTTCATCGTCGAAAATGTAACCGTCGAAACACAAACCAGACTCATTCCAATTCTCTCAAAAGCAACTGAAAACAACCAGATTCTTGATTTGCAGAATCTTTTAGAACGGTTTGCATTCGATAACGTTTGTAAATTAGCTTTTAACGTCGATCCTGGTTGTCTTGGCGGTGATTTTACCGCCGGAGCAGCCTTCATGCACGCGTTTGAAGAGGCTGCAATGATAAGTTCTGGAAGGTTCATGTGTCTTCTACCATTGTTATGGAAAATGAAAAAATATCTTAACGTTGGACCAGAACGGAGATTGAAACAGTCAATTGCAACCGTTCATGAGTTTGCTGATGAGATTATACGGTCGAGAATGGAAGCTAAAGAGGCTGGTGGTCAAGATTTGTTATCTCGTTTCATTGAAACAGAAGAAGCTTCACCGGAGTTTCTTCGCGATATTGTAATAAGTTTTATTCTCGCTGGGCGCGATACTACATCGTCCGCTTTGAGTTGGTTGTTCTGGATTTTATCTTCGAAACGCGACATTAAAGATAAAATAATCGAAGAAATTGAAATGGTGCGTTTAAAAAGTGGAGATAAAACGGCTTCGTTTGGATATGAAGAGCTGAAAGAGATGCATTACTTGCACGCGGCGATTAGTGAGACAATGAGGTTGTATCCGCCTGTACCGGTTGATACTAAGGCGTGTTTGAATGACGATGTTTTGCCGGATGGAACTAGGATAAAGAAAGATTGGTTTATTTCTTATCATACTTATGCTATGGGGAGAATGGAGAGTGTGTGGGGGAAAGATTGTAATGAGTTTAAACCGGAGAGGTGGTTGGAAAATGATAAGGATGGTGTTAGTGTGTGTAGAAGTGAGAGTCCGTATCGGTTTCCGGTGTTTCATGCAGGTCCTAGGATGTGTTTAGGGAAAGAAATGGCTTATATTCAGATGAAGTCTATTGCAGCTTCTGTTATGGAAAGGTTTGAGGTTGTTGCATTGGATAAAGATACTTGTCCTCAACATGTTTTGTCTTTGACTTTGAGGATGAAAAATGGGTTGCCTGTGAATGTAAAGAGAGTAGTAAGGTAG 1530 0.4059 MELFLFSHEPLFIFIFSLIFFLYLFYFHFFTTSKKHNNHGFKIYPLLGTLPEFILNRHRFLDWTTQILRNCPTNTAVFIRPGKIHGIITANPDNIQHILKTKFENYPKGERFISLLHDFLGNGIFNSDGDLWKLQRKTASYEFNTKSLRNFIVENVTVETQTRLIPILSKATENNQILDLQNLLERFAFDNVCKLAFNVDPGCLGGDFTAGAAFMHAFEEAAMISSGRFMCLLPLLWKMKKYLNVGPERRLKQSIATVHEFADEIIRSRMEAKEAGGQDLLSRFIETEEASPEFLRDIVISFILAGRDTTSSALSWLFWILSSKRDIKDKIIEEIEMVRLKSGDKTASFGYEELKEMHYLHAAISETMRLYPPVPVDTKACLNDDVLPDGTRIKKDWFISYHTYAMGRMESVWGKDCNEFKPERWLENDKDGVSVCRSESPYRFPVFHAGPRMCLGKEMAYIQMKSIAASVMERFEVVALDKDTCPQHVLSLTLRMKNGLPVNVKRVVR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00802 509 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Trre16g00802 509 PANTHER CYTOCHROME P450 27 502 - -
Trre16g00802 509 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 Gene3D Cytochrome P450 21 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 SUPERFAMILY Cytochrome P450 30 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00802 509 FunFam Cytochrome P450 31 508 - -
Trre16g00802 509 CDD CYP86A 75 500 - -
Trre16g00802 509 Pfam Cytochrome P450 42 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00802 Trre-Chr16 6130420 6131949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00802 40 505 Cytochrome P450 AT3G56630 61.489 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00802 - - gmx:100812147 731.48