Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00793 ATGTCCTCACCGGAAAATCTTCCATTAGAAACCGCTCAAAAAATCATTCTCCGATGGGACTCAACCGCCTCCGAAGAAGCTCGCGAAAAAATGATCTTCGATCAAACCACCACAAATCGTGAAGAAATCGATCTTTATCTCCAAGCCGTTGATGAAATCCAACGCTCCATATCCTCCACCTCTCTCTCCGACGACCACCACACCAAACCTACCTCCACCATCCAGATCGCCATGGCTCGCTTAGAAGACGAGTTTCGTAACATCCTTATCTCACATACAAATCCAATCGATCCTTCTTTAGATGAAGATTCTTCGTTTTCTTCAAAACGACTTAACGAAGATGAAGTTAGTTACGGCGGCGATAATGATGATGACGATGATGATAAGCTTCTTCGTTTTGATTCTACTTGTTCTGTTGCTACAACAACTTCTTCAAGCTACCGATCAACTAGTAGCATCCGTGAGATCGATCTGATACCTTCTGAAGCAGTTTCCGATCTCCGGTGTATCTCCGATAGAATGATTTCATCCGGTTATCTTCGTGAATGTATTCAAGTTTATGGAAGTGTGAGAAAATCTGCTGTTGATTCGAGTTTTAAGAAACTCGGTGTTGAGAAATTGAGTATTGGTGATGTTCAGAGATTGGATTGGGAACAGTTAGAAACGAAGATTCGGAGATGGATTAGAGCGGCTAAGGTTTGTGTTCGAACGCTTTTCGCAAGTGAGAAAAGATTATGTGAACAGATTTTTGATGGAATTGGTACTTCTATTGATGATGCTTGTTTTATGGAAACTGTTAAAGGTCCTGCAATTCAGCTTTTCAATTTTGCTGAAGCTATTAGTATTAGTCGTAGATCGCCCGAAAAATTGTTTAAAATACTTGATCTTCATGATGCTTTAATGGATTTGATTCCTGATATTGATGCTGTTTTTGATTCTAAGTCGTCTGAATCAATTAGGGTTCAGGCGGCTGAGATTTTGTCGCGTTTAGCGGAAGCTGCTAGAGGGATTTTATCTGAATTTGAAAATGCTGTTCTTAAGGAGCCTTCTAAGGTTCCTGTTCCTGGCGGAACCATTCATCCTTTGACTAGGTATGTTATGAATTATATAAGCTTGATTTCTGATTATAAGCAGACTTTGTATGAGCTTATCGTTTCCAAGCCTTTGAATGGTTCGAGGCATTCGGGTGACCCTTTGACTCCTGATATGGATTTCGATGAGCTTCAAGAGAAACCGCCTTTGGCTATTCATTTGATTTGGATTATTGTTATATTGCAATTTAATTTGGATGGTAAGTCAAAGCATTATAAAGATGCTTCTTTGTTGCATTTGTTTATAATGAACAATGTTCATTATATTGTTCAGAAGGTTAGAGGGTCGCCCGAGTTGAGGGAAATGATCGGGGATGATTATTTGAAGAAGTTGACTGGGAAATTTCGTCAGGCTGCTACTAGCTATCAGAGAGCGACTTGGGTTAGGGTTTTGTCTTGTTTGAGAGATGAAGGGTTACATGTGAGTGGTGGATTTTCTTCTGGTGTGTCGAAGAGTGCTTTGAGGGAAAGGTTTAAGGCTTTTAATGCTATGTTTGAGGACGTACATAGGACTCAAGCTGTTTGGTTGATACCGGATTCGCAACTTAGGGAGGAGCTTCGGATTTCTATATCGGAGAAGCTGATTCCCGCGTATAGGTCGTTCCTTGGACGGTTCAGGAGCCATATCGAGAGCGGAAGACATCCGGAGAATTATATTAAGTATTCTGTTGAGGATTTGGAGGACGCTGTTTTGGATTTTTTCGAAGGGATTCCTGTTTCGCAGCACACGAGAAGGAGATCTCAGTGA 1839 0.41 MSSPENLPLETAQKIILRWDSTASEEAREKMIFDQTTTNREEIDLYLQAVDEIQRSISSTSLSDDHHTKPTSTIQIAMARLEDEFRNILISHTNPIDPSLDEDSSFSSKRLNEDEVSYGGDNDDDDDDKLLRFDSTCSVATTTSSSYRSTSSIREIDLIPSEAVSDLRCISDRMISSGYLRECIQVYGSVRKSAVDSSFKKLGVEKLSIGDVQRLDWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFDGIGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDAVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLKEPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLYELIVSKPLNGSRHSGDPLTPDMDFDELQEKPPLAIHLIWIIVILQFNLDGKSKHYKDASLLHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLSCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEDVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00793 612 SUPERFAMILY Cullin repeat-like 40 599 IPR016159 -
Trre16g00793 612 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 600 IPR004140 GO:0000145|GO:0006887
Trre16g00793 612 Pfam Exo70 exocyst complex subunit 226 594 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre16g00793 612 MobiDBLite consensus disorder prediction 103 117 - -
Trre16g00793 612 FunFam Exocyst subunit Exo70 family protein 29 606 - -
Trre16g00793 612 MobiDBLite consensus disorder prediction 99 127 - -
Trre16g00793 612 Gene3D Exocyst complex component Exo70 15 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00793 Trre-Chr16 6050641 6052479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00793 9 612 EXO70 exocyst subunit family AT1G72470 69.565 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00793 K07195 - gmx:100808671 949.118