Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00768 ATGGCGCCAATACAATTATTGGAGCTTCCTAGTTGGGTCACATTGTTGACAGCATTTGCTATTCTCCTCCTCTTCGGCCGCCGTCTGCGCCGCCACAAATACAACCTACCACCAGGTCCAAAACCATGGCCCATAATAGGAAATCTCAACCTTATGGGATCCCTACCACACCAATCCCTCAATGGACTCACCCAAAAATATGGACCCATCATGCATGTATGGTTGGGATCCAAACCCGTCATTGTGGGCTCGTCTGCGAAAATAGCAAAAGAGTTCCTCAAAACTCATGATGCTACTTTTGCTGGACGACCCAAATTCTCTGCCGGAAAATACACAACTTACAATTACTCCGACATAACTTGGTCCCAATACAGTCCATATTGGCGTCAGGCTCGTAGAATGTGTCTATTGGAATTGTTTAGTGCAAGACGCCTCCAATCTTATGAGTTCATAAGAAACGAAGAGTTACATGCTTTATTGCACGAAATCTTCATCTCAAAAAATAAAACAATTTTGTTGAAAGACCATCTTTTAAATTTGAATCTAAATATTATAAGTCGCATGGTATTGGGGAAAAAGTATTTGGAAAAGACTGAAAATGCTTTTATTTCCCCTGATGAGTTTAAGAAGATGTTGGAAGAGTTGTTTTTGCTTAACGGGGTCCTTAATATTGGAGATTTTATTCCTTGGATTAATTTCATGGATTTTCAAGGTTATGTGAAGAGGATGAAGACTTTGGGTAAAAAATTTGATAGGTTTATGGAACATGTGTTGGAGGAACACATTGAAAGAAGAAAAAATGCTAAGGATTATGTTGCTAAAGATATGGTGGATGTGCTTTTGCAGCTTGCTGAAGATCCTAATCTTGAAGTCAAACTTGAAAGACATGGAGTCAAAGGCTTTACTCAGGACTTAATAGCAGGTGGAACAGAGAGCTCAACAGAGGATTTGAATATGGAGGAGATTTTTGGGTTATCCACACCTAAAAAAATACCATTAGAAGTTGTTGTGGAGCCTAGACTTGCTGATCATCTTTACTCCTTTTGA 1047 0.3945 MAPIQLLELPSWVTLLTAFAILLLFGRRLRRHKYNLPPGPKPWPIIGNLNLMGSLPHQSLNGLTQKYGPIMHVWLGSKPVIVGSSAKIAKEFLKTHDATFAGRPKFSAGKYTTYNYSDITWSQYSPYWRQARRMCLLELFSARRLQSYEFIRNEELHALLHEIFISKNKTILLKDHLLNLNLNIISRMVLGKKYLEKTENAFISPDEFKKMLEELFLLNGVLNIGDFIPWINFMDFQGYVKRMKTLGKKFDRFMEHVLEEHIERRKNAKDYVAKDMVDVLLQLAEDPNLEVKLERHGVKGFTQDLIAGGTESSTEDLNMEEIFGLSTPKKIPLEVVVEPRLADHLYSF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00768 348 PANTHER CYTOCHROME P450 98A9 12 314 - -
Trre16g00768 348 SUPERFAMILY Cytochrome P450 28 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00768 348 Gene3D Cytochrome P450 29 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00768 348 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00768 348 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00768 348 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00768 348 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g00768 348 Pfam Cytochrome P450 37 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00768 Trre-Chr16 5846764 5848603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00768 12 318 Cytochrome P450 AT5G07990 36.624 1.05e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00768 K20623 - ag:AAG44132 514.612