Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00765 ATGGGATGGGGTTGGGCCGGCGTAATTTGGTTGTACAGTTTGGTAACTTATATCCCTCTTGATTTTCTCAAAATCGCAATCCGCTATATTCTGAGCGGAAAGGCGTGGGATAATCTTTTGGAAAACAAGACCGCCTTTACTTCAAAGAAAGATTATGGCCGAGAAGAGAGGGCAGCACATTGGGCAGCAACACAAAGATCACTTCATGGTCTTCAGGAACCAACCCCGAATAACATTTTCAGCGAAACCAGCACTTACCGCGAACTTTCAGAAATTGCCGAACAGGCAATGAAACGTGCAGAAATGGCACGGCTCATGGAGAAGTATACATTTAAAGGGCGCGTCGAGAAGGTCGTCAAGCTTAAAGGTTTAGACCTTGATACTTCTAAGCATCATTTTACAATCTAA 408 0.4412 MGWGWAGVIWLYSLVTYIPLDFLKIAIRYILSGKAWDNLLENKTAFTSKKDYGREERAAHWAATQRSLHGLQEPTPNNIFSETSTYRELSEIAEQAMKRAEMARLMEKYTFKGRVEKVVKLKGLDLDTSKHHFTI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00765 135 PANTHER CALCIUM-TRANSPORTING ATPASE 5 66 - -
Trre16g00765 135 Gene3D - 84 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00765 Trre-Chr16 5832738 5833470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00765 2 135 Primary Pumps ATPases AT2G24520 70.896 3.30e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00765 K01535 - mnt:21385870 219.935