Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00764 ATGTGTTTGGGATCAAACTATGTTTCTTTGTATAACATAAATTTAAGATGCACTTTTAATAAAAAAGTAGTATCACCATTCCATGAGCTTCCACTTCAAGCACCTTCTACAGAAAAACTTAGAGTTGACTATTACAGAAAAAAATGTCCAAATGTTGAATCAATAGTAAACAATGCAGTTGAGATGAAAATTCAACAAACATTTGTGACAGCACCTTCTACACTTAGGCTCTTCTTCCATGATTGTTTTGTTCAGGGATGTGATGCTTCTGTGATGTTAGCTTCAAGAAATAGCACTTCAGAGAAAGATAATGATATCAATCTTTCATTAGCTGGTGATGGTTTTGACACAGTGATCAAAGCAAAAGCTGCAGTTGATAGTGTTCCTGGCTGCCAAAACAAGGTTTCATGTGCTGACATTTTGGCATTGGCAACTAGGGATGTCGTAAAATTGACAGGAGGGCCATCTTATGCAGTAGAGTTAGGAAGACTAGATGGAAGAATCTCGACAAAAGCCAGTGTCACAAACCATCTACCTCATCCTGAATTCAAACTAGCGAAGCTAACAAAAATGTTTGCTTCACATGGCCTAACTCTAACCGATCTAATTGCTCTATCAGGAGCGCATACTATTGGATTCCCTCACTGTAACCAATTCTCGAAACGAATTTACAACTTCAAAAGCGGGAAGGTAATTGATCCATCACTTAATCCGAGATTTGCAAAACAGCTCCAACAAGTGTGTCCAAAAGATGTGGATCCTAGACTTGCCATTGATATGGATCCTATTACACCTAGGACATTTGATAACCAATACTACAAGAATCTTCAGCAAGGAATAGGACTACTTTCTTCTGATCAATCTTTGTTTACTCATAAAAGTTCGAGAAACTTAGTCAACTTGTTTTCTTCCAACAACACCGCCTTCGAAAAAGCCTTTGTTATTGCTATAACAAAGCTTGGTCGAGTCGGGGTCAAAACTGGAAGGCAGGGCGAAATCAGGCACGATTGCTCGATGATTAACTGA 1026 0.385 MCLGSNYVSLYNINLRCTFNKKVVSPFHELPLQAPSTEKLRVDYYRKKCPNVESIVNNAVEMKIQQTFVTAPSTLRLFFHDCFVQGCDASVMLASRNSTSEKDNDINLSLAGDGFDTVIKAKAAVDSVPGCQNKVSCADILALATRDVVKLTGGPSYAVELGRLDGRISTKASVTNHLPHPEFKLAKLTKMFASHGLTLTDLIALSGAHTIGFPHCNQFSKRIYNFKSGKVIDPSLNPRFAKQLQQVCPKDVDPRLAIDMDPITPRTFDNQYYKNLQQGIGLLSSDQSLFTHKSSRNLVNLFSSNNTAFEKAFVIAITKLGRVGVKTGRQGEIRHDCSMIN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00764 341 SUPERFAMILY Heme-dependent peroxidases 40 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 Gene3D - 43 341 - -
Trre16g00764 341 PANTHER - 35 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 FunFam Peroxidase 43 189 - -
Trre16g00764 341 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 CDD secretory_peroxidase 39 338 IPR033905 GO:0004601|GO:0042744
Trre16g00764 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Trre16g00764 341 ProSiteProfiles Plant heme peroxidase family profile. 39 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Trre16g00764 341 Gene3D Peroxidase, domain 2 179 320 - -
Trre16g00764 341 Pfam Peroxidase 60 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g00764 341 FunFam Peroxidase 179 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00764 Trre-Chr16 5829015 5830780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00764 37 341 Peroxidase AT4G30170 66.557 2.03e-149 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00764 K00430 - gmx:100793327 521.931