Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00756 ATGACCATGGAACCAAACCCAACATCAGATCACATTCTTGACTGGCTTGAAGGTTCTGTCTCTTTCTTTCCATCATTTTTGGATGATCCATATAACAATGGTTACATCCAAGAGTATCCGTTATGGGATCAGAACCAAGATATAAATAACCAGTATCAAATTGATGTCAATACTAATTCCCCTAATGGCACCAACAGCACCAACAACATTGTTGCTGCTAGTACTACCACTAGCACCACATCACTTGAGCCTAATAGTTCTAACAATATACCCTTTTCTGATTTACCGAAGAAACGCAATGCCGAGGATGAATCGGGTCTCAAAAAACAATCACAAAACCAAAAGAATAAGAGAATCAAGAGCCGTCGGACGAATGAAGCTGATAATGGAGATGCAGCTATAGAAGGGACAGTGGTTAGAAAACCTGGTGGCAATAAGAAAGGTGCAGCTAAGGCCAATGGAAATAACAGTAGCAATGGAAACAAGGATGGTAGGTGGGCTGAGGAGTTGCTCAACCCTTGTGCTGCAGCCATAACTGGTGGAAACCTGAATCGCGTGCAACATCTCTTATATGTTCTTCATGAGCTAGCCTCAACTACAGGTGATGCCAACCACCGGCTTGCAGCGCATGGTCTCCGAGCACTGACACACCATCTATCTTCATCTTCATCATCTACCACATCAGGGACTATAACTTTTGCATCTACAGAACCGCGATTCTTCCAAAAATCGTTACTGAAGTTCTACGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTTCAAGTCCTAGCTGAAGAGCCGACCAATTCGCGTTCTCTTCATATCCTTGACATTGGAGTCTCTCATGGGGTTCAGTGGCCAACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCTCCACTGGTTCGTCTCACTGTGGTTACTGCTTCATCAACTGAAAATGACCAAAATATGGAAACCCCTTTTTCAATAGGTCCATGTGGTGATAACTTCTCTTCTAGACTCCTTGGTTATGCTCAGTCCATAAATGTCAATCTGCAGATAAACAAACTTGATAATCATCCATTGCAGACGTTAAATGCTCAAAGTGTTGACACCTCCCCTGATGAAACTCTTATTGTCTGTGCTCAGTTCAGGTTGCACCACTTGAATCATAACACTCCCAATGAAAGAAGTGAGTTTCTAAAGGTGTTGAGAGACATGGAGCCTAAAGGGGTGATATTGAGTGAGAACAACATGGAGTGTTGCTGCAGTAGCTGTGGTGATTTCGCCACTGGATTCTCTCGAAGAGTGGACTACCTATGGAGGTTTTTAGATTCAACCAGTTCAGCATTCAAAGGCCGTGAGAGTGATGAAAGGAGAATGATGGAAGGAGAGGCAGCAAAAGCATTGACAAACCAACGTGAGATGAACGAAGGGAAAGAAAAATGGTGTGAAAGAATGAAAGAAGCAGGATTTGCAAGGGAAGTGTTTGGAGAGGATGCAATTGATGGAGGTCGAGCTTTGTTACGGAAGTATGATAATAATTGGGAGATGAAAGTAGAAGAAGAGAACAGTACAACTGTGGGACTATGGTGGAAAGGTCAACCTGTTTCTTTCTGTTCTTTGTGGAAACTGGATAAATAG 1653 0.4313 MTMEPNPTSDHILDWLEGSVSFFPSFLDDPYNNGYIQEYPLWDQNQDINNQYQIDVNTNSPNGTNSTNNIVAASTTTSTTSLEPNSSNNIPFSDLPKKRNAEDESGLKKQSQNQKNKRIKSRRTNEADNGDAAIEGTVVRKPGGNKKGAAKANGNNSSNGNKDGRWAEELLNPCAAAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTTSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPTNSRSLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTENDQNMETPFSIGPCGDNFSSRLLGYAQSINVNLQINKLDNHPLQTLNAQSVDTSPDETLIVCAQFRLHHLNHNTPNERSEFLKVLRDMEPKGVILSENNMECCCSSCGDFATGFSRRVDYLWRFLDSTSSAFKGRESDERRMMEGEAAKALTNQREMNEGKEKWCERMKEAGFAREVFGEDAIDGGRALLRKYDNNWEMKVEEENSTTVGLWWKGQPVSFCSLWKLDK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00756 550 ProSiteProfiles GRAS family profile. 158 547 IPR005202 -
Trre16g00756 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 128 535 IPR005202 -
Trre16g00756 550 Pfam GRAS domain family 168 547 IPR005202 -
Trre16g00756 550 MobiDBLite consensus disorder prediction 96 111 - -
Trre16g00756 550 MobiDBLite consensus disorder prediction 75 164 - -
Trre16g00756 550 MobiDBLite consensus disorder prediction 75 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00756 Trre-Chr16 5750753 5752405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00756 2 547 GRAS Transcription Factor Family AT3G13840 50.995 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre16g00756 GRAS 1.5e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00756 - - mtr:11434050 917.146