Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00721 ATGCATGACATTATACAAGAAACGGCCTGGGAGATTGTTCGCCAAGAATCTGTTGAAGAACCTGGTAGCCAAAGCCGACTATTGGATCCTGATGACATTTATCATGGAAGTGAGTCAATCAGAAGTATGGCCATCAGACTATCTGAAATTAAGGAACTGCAGTTAAGCCCACAAGTATTTTCCAAGATGAGAAAATTGAAATTTTTGGATATTTATACTAATGTGTCTCAAAATGAAGGGAGTTTGTATCTTCCTCAAGGGCTTGAATCCTTGCCAAATGAACTGAGATATCTTCCGTTGGGAGTATTACACTTTGGATTCCTTGCCATCCAAGTTTCTGCAGAAAACCATGTTACATTGAACTTGTCTTATAGCCAACTGAAAAAACTTCGGCATGTAGTGAAGGATCTTGTGCATTTGAATGTCCTGATACTCCATTCATCCACACTCCTAACAGAGTTACCAGACTTTTCAAAGGCCACAAGTCTTGCAATAGTGGACCTTCATTTCTGTGTAGGGTTGACTAGTGTCCATTCATCTTTAGATCTAGGACACACTCACATTCAAAGCTTACCTAATAATATCAAGAATCTTACGAGGCCCCAACATCTAGACTTGCATCATTGCAGGGAGCTTAAAACTCTACCAGAACTTCCTCCATCGCTAGAAACACTAGATGCTGATGGTTGTGTATCACTAGAGAATGTAGTGTTCCGCTCAACTGCTAGTGAACAACTCGAGGAAAAGAAGAAAAAGGTTAGGTTTTGGAATTGCCTTGAACTAAATGAGCCTTCTCTCAAGGCTATTGAGTTGAATGCTCAAATTAACTTGATGAACTTTTCACACCAACATATATCCACATGGGACCGTGATCGTGATTACGATCACGACCACGATCTCAATCAAGGCTTGTACGTGTATCCAGGTAGTAAAATTCCAGAGTGGTTGGAATATAGTACAAGTACAACTACACATGATTACATAACTATTGATCTTTCTTCTCCTCCTTATTTCTCCGAGGTGGGATTCATTTTCGGCTTCATAATTCCAACCATCTCATCAGAGGGTTTAAATCTAAAATTTAAAATCAGTGATGGTGATGTGGAAGGTATCAAAGTATACTTGGACAGACCACTTCATGGAATTGAATCGGATCATGATTATCTAATGTATGACCCAAGATGTTCTCATTACCTAGCTAGCCGAGTCAATGATCAGTCACAGATTAAAATTCAGGTTACAGCATCATCAAGAACATTGACATCACAGTATGAGCTAGTGCATCATCAAGTCCTCGAGGAGAGTCCAACCTAA 1314 0.3965 MHDIIQETAWEIVRQESVEEPGSQSRLLDPDDIYHGSESIRSMAIRLSEIKELQLSPQVFSKMRKLKFLDIYTNVSQNEGSLYLPQGLESLPNELRYLPLGVLHFGFLAIQVSAENHVTLNLSYSQLKKLRHVVKDLVHLNVLILHSSTLLTELPDFSKATSLAIVDLHFCVGLTSVHSSLDLGHTHIQSLPNNIKNLTRPQHLDLHHCRELKTLPELPPSLETLDADGCVSLENVVFRSTASEQLEEKKKKVRFWNCLELNEPSLKAIELNAQINLMNFSHQHISTWDRDRDYDHDHDLNQGLYVYPGSKIPEWLEYSTSTTTHDYITIDLSSPPYFSEVGFIFGFIIPTISSEGLNLKFKISDGDVEGIKVYLDRPLHGIESDHDYLMYDPRCSHYLASRVNDQSQIKIQVTASSRTLTSQYELVHHQVLEESPT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00721 437 Gene3D Ribonuclease Inhibitor 21 177 IPR032675 -
Trre16g00721 437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 251 IPR044974 GO:0006952
Trre16g00721 437 Gene3D Ribonuclease Inhibitor 178 255 IPR032675 -
Trre16g00721 437 SUPERFAMILY L domain-like 45 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00721 Trre-Chr16 5493539 5495943 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00721 1 234 WRKY Transcription Factor Family AT4G12020 32.039 3.25e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00721 - - tpra:123883106 571.622