Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00714 ATGTCTGGATTTGATTCATTAAATTTTTCGGATGATGCTAAGCTTGTCGAAGAAATAGTTCAAAATGTGTTGACAAAGTTGAATCAAGTGGACCAAGGAAAGTCAAAAGGACTTGAATCTGTTGAAGAACCTGGAAGCCGAAGCCGACTATTTGATCCTGATGACATTTATCATGTATTGAAAGATGACAAGGGAAGTGAAGCCATCAGAAGTATGGCCATTAGATTATCTGAAATTAAGGAGCTGCAGTTAAGCCCTCAAGTATTTGCCAAGATGAGCAAGTTGAAATTTTTGGATATTTACACTAAGGGGTCTCCAAATGAAGGTAGTTTGTCTCTTCCTCGAGGGCTTGAATTTTTGCCTAATGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGAATCCTTGCCATCCAAGTTTTCTACAGAAAACCTTGTTACATTGAGCTTGCCTTATAGCCGATTGAAAAAACTTTGGCATGGAGTGAAAGATCTTGGGAATTTGAATGTCCTGATACTCCATTCATCCACACTCCTAACAGAGCTGCCAGACTTTTCAAAGGCCACAAGTATTGCAATAATGGACCTTCATTTCTGTGTAGGGTTGACTAGTGTCCATCCATCTGTTTTCTCTCTCAAAAAGCTAAAGAAACTGGATCTGAGTGGATGTGTTTCCCTTACAAGCCTTCAAAGCAATAATACCCATTTAAGTTCCCTTAGTTATCTCTCCCTCTACAACTGCACATCACTGAAGGAATTTTCAGTGACCTCGAAGAATATGAACGAACTGAATTTAGAACTCACAAGTATCAAAGAACTACCCTCATCAATTGGACTTCAAACCAAGCTTGAAAAGTTACATCTCGGACACACTCACATTGAGAGCTTGCCTAGGAGCATCAAGAATCTTACAAGTTTGAAACAACTAGGCTTACATCATTGCAGAGAGCTTCAAACTCTACCGGAGCTACCTCTATCGCTAGAAATACTAGCTGCTATTGGTTGTGTATCACTAGAGAATGTAGTCTTCGGTTCAACTGCTAGTGAACAACTTAAGGAAAAGAGGAAAAGGGTTACCTTCTGGAATTGCCTTAAACTAAATGAGCCTTCTCTCAAGGCTATTGGGTTGAATGCTCAAATTAACATGATGAGCTTTTCACACAAACATATATCCACATGCGATCGTAATCGTGATCGTCATCATGATCATGATCACGATCTTAATCAACACATGTATGTGTATCCAGGTAGCAAAATTCCAGAGTGGTTGGAATATAGTACAACTACAAATGATTTCATAACTATTGATCTTTCTTCTGCTCCTTATTTCTCTAAGTTGGGCTTCATTTTTGGCTTCATCATTCCAACCATCTCATCAGAGGGTTCAATTCTTAAATTCAAAATCAGTGATTGTGATGGTGAAGATGAAGGTATTAAAGTGTACTTGGACAGACCACACCATGGAATTGAATCGGATCATGTGTATCTAATGTATGACCCAAGATTGTCTCATTACCTAGCTAGCCGAGTCAATGATTGGTCAATGATTAAAATTCAGGTTAGAGCATCATCAAGAACACCAACATCACAATACATGCCAGTGCAGTTAAGAGGGTTTGGGGTTAGCCTAGTAACTCCTTCACTATATGACAAGTTTAAACAGCAGTTGGAATTTGGTGATGGAATCGTTGTTCCAGATAATACATGTTCGGTGGAAGAAAGATCGATGTTTACAGGAATTTAA 1746 0.3883 MSGFDSLNFSDDAKLVEEIVQNVLTKLNQVDQGKSKGLESVEEPGSRSRLFDPDDIYHVLKDDKGSEAIRSMAIRLSEIKELQLSPQVFAKMSKLKFLDIYTKGSPNEGSLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSTENLVTLSLPYSRLKKLWHGVKDLGNLNVLILHSSTLLTELPDFSKATSIAIMDLHFCVGLTSVHPSVFSLKKLKKLDLSGCVSLTSLQSNNTHLSSLSYLSLYNCTSLKEFSVTSKNMNELNLELTSIKELPSSIGLQTKLEKLHLGHTHIESLPRSIKNLTSLKQLGLHHCRELQTLPELPLSLEILAAIGCVSLENVVFGSTASEQLKEKRKRVTFWNCLKLNEPSLKAIGLNAQINMMSFSHKHISTCDRNRDRHHDHDHDLNQHMYVYPGSKIPEWLEYSTTTNDFITIDLSSAPYFSKLGFIFGFIIPTISSEGSILKFKISDCDGEDEGIKVYLDRPHHGIESDHVYLMYDPRLSHYLASRVNDWSMIKIQVRASSRTPTSQYMPVQLRGFGVSLVTPSLYDKFKQQLEFGDGIVVPDNTCSVEERSMFTGI 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00714 581 Pfam Leucine Rich Repeat 145 164 IPR011713 -
Trre16g00714 581 SUPERFAMILY L domain-like 74 393 - -
Trre16g00714 581 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 255 IPR044974 GO:0006952
Trre16g00714 581 Gene3D Ribonuclease Inhibitor 59 259 IPR032675 -
Trre16g00714 581 Gene3D Ribonuclease Inhibitor 260 378 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00714 Trre-Chr16 5464400 5469106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00714 39 331 WRKY Transcription Factor Family AT4G12020 40.397 1.37e-49 183