Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00665 ATGGCGAATAACGATTCAAACTCCGATCAAAATTCCGAAACCCGATTATACAATCCATACAAAGACCTCGAAGTTCCCATCCGAAATCTCTACCAACTCCCAACCTCTCCGGAGTTTCTCTTCAACGAAGAAGCTATCCGTAAACGCCGTTCTTGGGGAGAAAATCTCACCTTCTACACTGGCTGCAGTTACCTCGCCGGTTCAATCGCCGGTGCCGGAGTCGGATTCGTTGACGGTGTTCGATCTTTTGAGTCCGGTGACACCATGAAGCTTCGGGTTAATCGGATTCTTAACTCCTCCGGACATGCTGGTCGGACATGGGGAAACCGAGCTGGAGTCATTGGGTTGCTTTACGCTGGGATTGAGAGTGGGATTGAAGCTGTCAGGGATACTGATGATGCATGGAATAGTGTTGCGGCGGGGCTTGGGACCGGTGCACTTTATCGAGCGGCTAGAGGGGTGAGATCGGCTGCGGTGGCTGGTGCTGTTGGTGGTGTTCTTGTTGGAGCTGCTGTAGCTGCTAAGCAGGTGTTGAAAAGATATGTGCCTATATGA 555 0.5117 MANNDSNSDQNSETRLYNPYKDLEVPIRNLYQLPTSPEFLFNEEAIRKRRSWGENLTFYTGCSYLAGSIAGAGVGFVDGVRSFESGDTMKLRVNRILNSSGHAGRTWGNRAGVIGLLYAGIESGIEAVRDTDDAWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGAAVAAKQVLKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00665 184 PANTHER TIM23 22 178 IPR045238 GO:0022857
Trre16g00665 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00665 Trre-Chr16 5039968 5040522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00665 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 70.968 5.43e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00665 K17794 - gmx:100777112 274.248