Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00638 ATGGCCAAGCATTATGTTGTTTTACTCTTCTGTGTGTCTTTGGTTTTGGCATCAATAATTTCTTTCATTTGTGATGCCACCAAGAGTGGTGATGAAACCAGTAAACTTTACATTGTATATATGGGCTCACTTCCTAAGGAAGCATCATATTCTCCAACCTTTCATCATCTTAGCATGTTGCAACAAGTTATTTATGGTAGTGATATAGAAAATCGCTTGGTTCAAAGTTACAAGAGGAGTTTTAATGGTTTTTCTGCCATACTCAATGACCAACAAAGGGAAAAACTTGTTGGCATGAAAGGTGTTGTCTCAGTGTTTCCAAGCCAAGAGTATCACTTTCAAACCACAAGATCGTGGGACTTTCTTGGTTTACCTCATCAATCAATCAAAAGAGGTAAAAACGTTGAGAGTGATTTGGTGATTGGAGTCTTAGACAGCGGAATTCGGCCGGAATCTAAAAGTTTTAACGATAAAGGTATTGGTCCTATTCCCAAAAAATGGAGGGGAGTTTGTGCAGGCGGGGGTAATTTCAGTTGCAACAATAAGATCATCGGAGCACGGTGGTACCCTGGCAGTGAAGGTGAGAGTGCAAGAGACGAATTTGGTCATGGAACACATGTGGCATCAATAGTAGGCGGAAGAGAGATAAAGGGTGTGAGCTATCATGGTATTGCAGAAGGCACTATAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGTATACAAAGTTTGCAACCTAAAATGTCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATTGCTGATGGAGTTGACATCATTAGCATATCTCTTGGAAACGAAAATGTTGTTGACTTTCTCAAAGATGCTATTGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTCACAGTGCAAGCAGTAGGCAACTCTGGTCCAAACCCAAGTACTATTACAAATGGAGTACCTTGGTTATTCAGTGTTGCCGCAACTACCATAGATCGTCAATTCATTGACAAAGTCATTCTTGGAAATGGAAAGACTTTTATTGGGAAGTCCATTAATATTGTCCCCTCAAACGGTACAAAATTTCCAATAGTTGTGTGTAATGATACGGCTTGCCATGGGGATTTTAGATCCCCTGAAAAATGTCCATTTATAGACGAAAAAGTGGTAAAGGGTAAGATTGTTTTGAGTGGAGATTTAGGTTGTGCAACATTCGCTTATCAACATGGGGCAATTGGTTCCATCGTTAATTTTACATATGATGGTTCTTTTATCACTCATCGACCTTCACTTAACTTGCATTCAAAAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTGATGTCGTTCAAGACACCACTGCTCCTAAAATTGCATCTTTCTCTTCTCGTGGTCCAAATCCTATTGTACCAGAAATTATGAAACCAGATATAAGTGCACCTGGAGTCGATATCTTGGCTGCATATTCACCTAACGGACCAATCCCTAATGAGTTGATTTATCCTGGACATGAGAATTACATTGTACTATCTGGTACCTCTATGGCATGTCCCCATGCTGCTGCGGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACGACAAAACCGGTTAATGCTAATGATAATGATATGCTAGGTGAGTTCGCTTATGGATCTGGAAATGTCAATCCACAACAAGCTCTTCACCCAGGACTGATTTATGACATTGCTAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATAATGATACCAAAATTGAACAAATTAGTGGAGAAAAATCAAGTTGCTATGGAGCTTCAAATAGATATTTGGTGAAAGATATAAACTATCCTGCACTGGTGATTCTTGTTAGGCTTCATAAGCATTTTAATGTTAAGATTCATAGAACAGTGACAAATGTTGGCTCTCCTAACTCAAGCTACACGGCTACTATCATTCCAATTCCAAAAATCAAGATTAGCGTGGTGCCAAAACTTCTCTCGTTCAAATCCTTACATGAGAAACAATCATTTGTTGTGATTGTTACCGGAGTAGCAAAGTCAAATCAAACTGTATTTTCTTCATCACTGGTTTGGTCAGATGGAACTCACACTGTGAAGAGTCCAATCATTATACAAAGACTCTCTTAA 2199 0.3884 MAKHYVVLLFCVSLVLASIISFICDATKSGDETSKLYIVYMGSLPKEASYSPTFHHLSMLQQVIYGSDIENRLVQSYKRSFNGFSAILNDQQREKLVGMKGVVSVFPSQEYHFQTTRSWDFLGLPHQSIKRGKNVESDLVIGVLDSGIRPESKSFNDKGIGPIPKKWRGVCAGGGNFSCNNKIIGARWYPGSEGESARDEFGHGTHVASIVGGREIKGVSYHGIAEGTIRGGVPSSRIAVYKVCNLKCRDDNILAAFDDAIADGVDIISISLGNENVVDFLKDAIAIGSFHAMEKGILTVQAVGNSGPNPSTITNGVPWLFSVAATTIDRQFIDKVILGNGKTFIGKSINIVPSNGTKFPIVVCNDTACHGDFRSPEKCPFIDEKVVKGKIVLSGDLGCATFAYQHGAIGSIVNFTYDGSFITHRPSLNLHSKDFDLVQSYTYSTKYPVAEILKSDVVQDTTAPKIASFSSRGPNPIVPEIMKPDISAPGVDILAAYSPNGPIPNELIYPGHENYIVLSGTSMACPHAAAVAAYVKSFHPDWSPAAIKSAIMTTTKPVNANDNDMLGEFAYGSGNVNPQQALHPGLIYDIAKQDYMQMLCNFGYNDTKIEQISGEKSSCYGASNRYLVKDINYPALVILVRLHKHFNVKIHRTVTNVGSPNSSYTATIIPIPKIKISVVPKLLSFKSLHEKQSFVVIVTGVAKSNQTVFSSSLVWSDGTHTVKSPIIIQRLS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00638 732 Gene3D Peptidase S8/S53 domain 138 595 IPR036852 GO:0004252|GO:0006508
Trre16g00638 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Trre16g00638 732 Pfam Fibronectin type-III domain 630 728 IPR041469 -
Trre16g00638 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 727 IPR045051 -
Trre16g00638 732 ProSitePatterns Serine proteases, subtilase family, histidine active site. 203 213 IPR022398 -
Trre16g00638 732 Pfam Subtilase family 137 572 IPR000209 GO:0006508|GO:0008236
Trre16g00638 732 CDD PA_subtilisin_like 336 452 - -
Trre16g00638 732 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Trre16g00638 732 Gene3D - 599 731 - -
Trre16g00638 732 ProSiteProfiles Serine proteases, subtilase domain profile. 118 582 - -
Trre16g00638 732 SUPERFAMILY Subtilisin-like 134 582 IPR036852 GO:0004252|GO:0006508
Trre16g00638 732 ProSitePatterns Serine proteases, subtilase family, serine active site. 520 530 IPR023828 -
Trre16g00638 732 Gene3D - 329 459 - -
Trre16g00638 732 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Trre16g00638 732 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Trre16g00638 732 PRINTS Subtilisin serine protease family (S8) signature 519 535 IPR015500 -
Trre16g00638 732 CDD Peptidases_S8_3 111 554 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00638 Trre-Chr16 4790531 4793592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00638 8 728 Subtilisin-like Serine Gene Family AT3G46850 50.750 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00638 - - psat:127076787 874.004