Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00607 ATGGGGGGCATAGGTAAGACAACACTTGCTGCTGCTATGTTTCACAAACTCTCTTTTCAATATGAAGGTAGTTGCTTCTTAGAAAATGTGACAGAAGTATCATCAAGGCATGGAATCAACTATACATGCAACAAACTTCTTTCCAAGTTACTAAGGGAAGATCTTGATATTGACACTTCTAAATTAATACCATCCATGATCATTAGAAGACTCAAACGCATGAAATCTTTCATTGTGCTAGATGATGTACATACTTTAGAACTTCTGCAAAGCTTGATTGGAGTGGGATGTGGTTGGCTAGGAGCTGGTAGCACGGTCATTGTGACAACAAGGGATAAACATGTGTTGATAAGTGGAGGAATTGAAAAAATTCATCAAGTTAAGAAGATGAACTCCCGAAACTCTATTCAACTTTTTAGCTTGAATGCTTTTGGCAAAACCTTACCTAAGGAGGGATTCGTGGAGCTCTCAGAAAGAGCAGTTGATTATGCTGACGGCAATCCTTTAGCTCTGAAAGTATTAGGAGGATCATTTCTTCGCTATAAAAGTGAAATAGAATGGAAATGTGCACTAGCTAAACTGAAGGAAATTCCTAATGCAGAAATTGATAGGATATTTAGATGGAGTTATGATGAATTGGATGATAAAGACAAAAACATATTTCTAGATATAGCATGTTTTTTCAAAGGACATGAAAGGGAAAGGATAACAAAAAATTTAAATGAGTGTGGTTTCTTTGCAGATATAGGGATAAGACTTCTTTTAGACAAGGCTCTTATAAGACTTGACTTCAAAAATCGCATACAAATGCATGACTTAATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATCTCCGAAAAATCCCGGACAACGAAGTAGATTATTTGATCCTAAGGAAATTTGTGGCGTGTTGAAAAATAATAGAGGAACCGATAATGTTGAAGCCATATTTTTTGATGCTAATGAATGTACAAATATAATTTTAAGCCCCCAAGCATTTGAAAAGATGGTAAACCTAAGGTTACTTGCTATTCATGACCAAAAGGGATATGTAAGCCTTCCACATGGTCTCAACTTATTGCCAGAAAATTTGAGATATGTTTCGTGGCATGGATATCCATGGAAATCTCTGCCTCCAACCTTTTGTCCTGAAATGCTTGTGGAGCTTTCCTTGAAAGAAAGCCATGTACAAAAACTTTGGAACGGAGTATTGAATTTGCCAAATTTAGAGATACTAGACCTTAGTTCCTCCAAAAAGCTGATAGAATGTCCAAATGTGTCTGGTTTCCCAAATCTAAAAGAAGTAATACTTGGTGATTGTGAAAGCTTGCTTGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTACAAGAATATTCATGGCTGGATGCACATCACTAAAGAGCCTTTCGAGTAACACTTGTTCGCCAGCCCTCTTGGAGTTCAATGTTATCGATTGCATCAATCTCCAAGAGTTCTCGGTCACATTTTCTTCCGTTGATAATTTGTTTCTGGCTTTACCAAAGTGTGGTGGGAATGAACTTCCATCATCAATATTGCAAACAAAAAATCTTAAACTGTTTCTCTTTCCTATGATTGAAGATCTTGTGAATCTTCCTGAAAACTTTGCCGAAAATATTTTACTCACGAGTCCGGTGAATCGCGACATTGACCCTTCCATCGTCTTACATAAATTACTTTCTAGTCCTGCCTTCGTCAGTGTAACACACTTAAACTTGACCAATATTTCTGTCTTGTCTGAAATTCCAGACAATATCTACTTACTATCATCATTAGAGTCTTTAACACTAATTGGTCTGGCCATTAGAAGCTTGCCTGAAACCATCAAGTATCTTCCCCAAATCAGTGAGTTTGGTGTTTACGATTGTAAAATGCTTCAATCTATTCCGACGTTTTCAAAGTTCATTTCATCTTTAGTTGTCTGGAATTGTGAATCTATTGAGAAAGTGTTGATGAGTTCATCAACTCCTTGTTTGACTGTGCTCCTTAACTGCAATAAATTGGATATACATTCATACCAAACAGTTTTAAAAGATGCTATTGCTGGGATTGAACTTAGAGCAAGACTATCTTCTTCACAACAAGACGTTACGTTTTTATCCAATGAGTATTTGTTACCTGTTATGCCTGGTAGAGAATATTGGTTCCAGTACACTTCTACACAAGTTTCTTTCACTCTTGAGCTTCCTCGTAATTTATTTGGTTTTGCGTACTACTTGGTTATTTCTCAAGGCCGTGTAGAAAATGGTGCATATTTTCGATGTGAGTGTTATTTGGAAAATAGTGCTACTATAACAAGTTTCATGAGAGTCAAAAGCATGGGGCATCACTGGACTAATCTTGAGAATTCAATTCACATGATGTCAGATCATATTGTTTTATGGTATGATCCAGTAAGTTGCAAGCAGATAATGGATGCAGTTGAAGCCATTAATGATGTGAATAGCACCAGTTACAATCCAAAACTTAAATTTAGATTCTTCATTGATGAAAGTGAAACTCTATATGATGAAATGACGATAAAAGAGTGTGGGTTTCGCTGGATTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACATTTGAATATTTATATACTAGTAACAGCAAGGAAGTAAGAATCATTCAATACAACATGAAGTCAGATTATGTGGTTTTATGGTATGATCCAGTAAGTTGCAAGAAGATAATGGAAGAAATAAAAGCCATTAATGATGTGAACAAGACTGGTCACAGTCCAAAGCTTACATTTAGATTCTTTTTTTATGAAACTTTACATGATGAAGTAAAGATACAAGAGTGTGGTTTTCATTGGATGTATCAAGAAGAAGCAGCTTCTTCAACAGTTTTTGAATCCCATGATGATGAAGATAAAGAAACAATTCCTCCAACAATGAAATTAAAGCAACGTGTCTTTGGAAATACAATTTACAGGGGATAA 3177 0.3554 MGGIGKTTLAAAMFHKLSFQYEGSCFLENVTEVSSRHGINYTCNKLLSKLLREDLDIDTSKLIPSMIIRRLKRMKSFIVLDDVHTLELLQSLIGVGCGWLGAGSTVIVTTRDKHVLISGGIEKIHQVKKMNSRNSIQLFSLNAFGKTLPKEGFVELSERAVDYADGNPLALKVLGGSFLRYKSEIEWKCALAKLKEIPNAEIDRIFRWSYDELDDKDKNIFLDIACFFKGHERERITKNLNECGFFADIGIRLLLDKALIRLDFKNRIQMHDLIQEMGKQIVREESPKNPGQRSRLFDPKEICGVLKNNRGTDNVEAIFFDANECTNIILSPQAFEKMVNLRLLAIHDQKGYVSLPHGLNLLPENLRYVSWHGYPWKSLPPTFCPEMLVELSLKESHVQKLWNGVLNLPNLEILDLSSSKKLIECPNVSGFPNLKEVILGDCESLLEVDSSIFLLQKLTRIFMAGCTSLKSLSSNTCSPALLEFNVIDCINLQEFSVTFSSVDNLFLALPKCGGNELPSSILQTKNLKLFLFPMIEDLVNLPENFAENILLTSPVNRDIDPSIVLHKLLSSPAFVSVTHLNLTNISVLSEIPDNIYLLSSLESLTLIGLAIRSLPETIKYLPQISEFGVYDCKMLQSIPTFSKFISSLVVWNCESIEKVLMSSSTPCLTVLLNCNKLDIHSYQTVLKDAIAGIELRARLSSSQQDVTFLSNEYLLPVMPGREYWFQYTSTQVSFTLELPRNLFGFAYYLVISQGRVENGAYFRCECYLENSATITSFMRVKSMGHHWTNLENSIHMMSDHIVLWYDPVSCKQIMDAVEAINDVNSTSYNPKLKFRFFIDESETLYDEMTIKECGFRWIYEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETFEYLYTSNSKEVRIIQYNMKSDYVVLWYDPVSCKKIMEEIKAINDVNKTGHSPKLTFRFFFYETLHDEVKIQECGFHWMYQEEAASSTVFESHDDEDKETIPPTMKLKQRVFGNTIYRG 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00607 1058 PRINTS Disease resistance protein signature 70 84 - -
Trre16g00607 1058 PRINTS Disease resistance protein signature 164 178 - -
Trre16g00607 1058 PRINTS Disease resistance protein signature 406 422 - -
Trre16g00607 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Trre16g00607 1058 MobiDBLite consensus disorder prediction 861 942 - -
Trre16g00607 1058 Gene3D Ribonuclease Inhibitor 557 711 IPR032675 -
Trre16g00607 1058 Gene3D - 129 214 IPR042197 -
Trre16g00607 1058 Gene3D Ribonuclease Inhibitor 306 509 IPR032675 -
Trre16g00607 1058 Gene3D - 1 120 IPR027417 -
Trre16g00607 1058 SUPERFAMILY L domain-like 269 659 - -
Trre16g00607 1058 Coils Coil 856 941 - -
Trre16g00607 1058 Pfam NB-ARC domain 1 212 IPR002182 GO:0043531
Trre16g00607 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 656 IPR044974 GO:0006952
Trre16g00607 1058 MobiDBLite consensus disorder prediction 861 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00607 Trre-Chr16 4520052 4524318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00607 1 653 WRKY Transcription Factor Family AT5G45050 31.241 4.23e-78 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00607 - - psat:127076382 1121.69