Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00606 ATGCTTGTGGAGCTTTCCCTCAAAGAAAGCCACGTGCAAAAACTTTGGAATGGAGTACTGAATCTGCCAAATTTAGAGACACTTGACCTCAGTAACTCCAAAATGCTAGTAGAGTGTCCAAATGTAGCCGGTTCTCCAAATCTAAAACGTGTAACACTTGATAATTGTGAAAGCTTGTCTGAAGTTGATTCATCGATTTTCCTTCTCCAAAAGCTTGAAAGATTATGCATGTCTAAATGTACGTCACTTAAGAGTCTTTCCGGTAACACTTGTTCACCAGTCCTCGGTGAATTGAATGCTTTGGATTGCACCAATCTCCAAGAGTTCTCAGTCACATTTGCTTCAATTGATCGGTTGGCTTTGGGTTTATCAAAGTGGGTTGGGAATGAACTTCCATCATCAATATTGCATACAAAAAATCTTAAAACCTTTGTCTTTCCTATGATTGAATCTCTTGTGGATCTTCCTGGAAAATTTGCCGATTGTATTTGGCTTTTGAGTCCACCGCATCCTGAACGTAATCCTCTCATCACCTTCCATAAAGTACTTTCTAGTCCTGCATTCATGAGTGTAAAACACTTAAACTTGTCTAATATTCCTAACTTGTCTGAATTCCCAGACAATATCTTCTTACCTAAATTAGAGTCATTAATACTAATTGATATGGTCATTAGAAGCTTGCCTGAAACCATTATGTATCTTCCCCGACTCAATTGGCTTCGTGTTTACAATTGTAAAATGCTTCAATCTATTCCAGCACTTCCACAGTTTCTTCCATTTTCCATTGTCTCGAATTGTGAATCTCTTGAGAAAGTGTTGATCAGTTCATTTTTCAAACAATATCACAAACCCAATCGTTTTTTTACAGTGCTCCTTAACTGCGAAAAATTGAATCCACATTCATACCATACAGTTTTAAAATATGCTATTGATGGGATGGAACATGCTGCAAGACTAAATTCAGAAAAAGAAGATGGTATTATAGGGTACTTTTTACCTGCTATGCCAGACGTTGAATATTGGTCCCATTACACTTCTACACAAGTTTCTTTCAGTCTTGAGCTTCCTCCTAATTTGTTGGGTTTCGCCTACTACTTGGTTCTTTCTCAAGGCCATATGGGACATGGTGTAGATTTTGGATGTGAGTGCTACATGAACAATAGTTTAGGTGAAAGGATCTATATAACAAGTTTCGCAAGACGCAACTTCTTTGAATTTAACTGGAATTATATTGAGAATTCGATCCACATGATGTCAGATCATGTGGTTTTATGGTATGATTCCGTAAGTTGCAAGCAGATAATGGAAGAAATGAAAGCCATTAATAATGTGAACAGCACCAGTTACAATCCAAAGCTTACATTTAGATTCTTTATTGATGAAACTTTACATGATGAAACTTCATACAATGAAGTAGAAATAAAGGAGTGTGGTTTTCGCTGGATATATCAAGAAGAAGCATCTTGTTCAACAGTTTTTGAATCCCATGACAAAGAAGAAGAAACAATTCGTCCAAGAAAGAAATTAAAGCAAGACATCTTTGGAACTTCAACCGGCCTAGAATTAGATGTAACATAA 1578 0.3663 MLVELSLKESHVQKLWNGVLNLPNLETLDLSNSKMLVECPNVAGSPNLKRVTLDNCESLSEVDSSIFLLQKLERLCMSKCTSLKSLSGNTCSPVLGELNALDCTNLQEFSVTFASIDRLALGLSKWVGNELPSSILHTKNLKTFVFPMIESLVDLPGKFADCIWLLSPPHPERNPLITFHKVLSSPAFMSVKHLNLSNIPNLSEFPDNIFLPKLESLILIDMVIRSLPETIMYLPRLNWLRVYNCKMLQSIPALPQFLPFSIVSNCESLEKVLISSFFKQYHKPNRFFTVLLNCEKLNPHSYHTVLKYAIDGMEHAARLNSEKEDGIIGYFLPAMPDVEYWSHYTSTQVSFSLELPPNLLGFAYYLVLSQGHMGHGVDFGCECYMNNSLGERIYITSFARRNFFEFNWNYIENSIHMMSDHVVLWYDSVSCKQIMEEMKAINNVNSTSYNPKLTFRFFIDETLHDETSYNEVEIKECGFRWIYQEEASCSTVFESHDKEEETIRPRKKLKQDIFGTSTGLELDVT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00606 525 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 13 148 - -
Trre16g00606 525 SUPERFAMILY L domain-like 2 298 - -
Trre16g00606 525 Gene3D Ribonuclease Inhibitor 1 122 IPR032675 -
Trre16g00606 525 Gene3D Ribonuclease Inhibitor 123 298 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00606 Trre-Chr16 4516001 4517858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00606 2 280 WRKY Transcription Factor Family AT5G45050 26.389 1.52e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00606 - - psat:127076381 582.408