Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00605 ATGCATGACTTGATACAAGAAATGGGAAAACAAATTGTTCGCGAAGAATCTCCTAAAAATCCCGGACAACGCAGTAGATTATGTGATCCTAAGGAAGTTTGTGACGTGTTGAAAAATAGTAGAGGAACTGAGATTGTTGAAGCCATATTTTTTGATGCTAGTGAATATACAAATATAAGTTTAAGTCCCAAAGCATTTGAGAAGATGCTTTCCTTGCAAAAAAGTAACGTAGAAAGACTTTGGAATGGAGAAACGAATTTGCCAAATTTAGAGAAAATTGACCTCACTGGCTCCAACAAGTTGATAGAGTGTCCAAATATGGCTGATTTGGGTGGGAATAAAATTCCATCATCAATATTGAATAATAAGAATGTTAGAATCTTTTACTTTCCTATGATTGAATGTCTTGTGGATCTTCCTGAAAACTTTGCCAATCATATTTACCTTGGGAGTCCACTGAATCCTGAAAATGATTCTTTCATCACCTTACATAAAGTACTTTCTAGTCCTGCCTTCGTCAGTTTGAAACACTTGTGCCTTACTGATAATCCTACCTTGTCTGAAATCCCAGACAATATCTTCTTACTATCATCATTAGAGTCTTTAATTCTAATGGACATGGCCATTACAAGCTTGCCTGAAAACATTAAGTATCTCCCCCAACTCAATCAACTTAATGTTTTGAATTGTAAAAAGCTTCAATCTATTCCAGCGCTTTCGCAGTTCATTCCATTTTTCATTGTCTTGAATTGTGAATCTCTTGAGAAAGTGTTGAGTTCAATGTGTGAAGCATGTGACAAACCCAATCCTTGTTTTTCTGTTCTCATTAACTGCAAAAAATTGGATCTACATTCATACCAAACAGTTTTGGAAGATGCTATAGATGGGATTGAACAACGAGCAAGACTAAATTCTGCAAATGAAGATGATATTATTGGGTACTTGTTACCTGATATGCCTGGCAGAGAATATTGGTTCCATTACCATTCTACACAAGTTTCTTTCACTATCGAGCTTCCTCCTAATTTGTTGGGTTTTGCCTACTACTTTGTTCTTTCTCAAGGCCATATGAAAAAAAGTGTAAATTTTGGATGTGAGTGCTACTTGGAATATAGTTCAGCTGAAAGGATCTATATAACAAGTTTCACAAGATCCAACTCGTTCATTTATGACTTAAGTTACAGTCCTTTACTCCACTTAATGTCAGATCATGTGGTTTTATGGTATGATCCAGTAAGTTGCCAGAAGATAATGGAAGAAATAAAAGCCATTAAGGAATTGAACAGCACCAGTTACAGTCCAAAGCTCACATTTAGATTCTTTATTGATGAAGCTTTACATGATGGAATAGGCATAAAAGAGTGTGGGTTTCGCTGGATATATCAAGAAGAAGCAGCTTTTCAACCATTTTTGAATCCCAAGAAGAAGAAGAGGAGGAGGAGGAGGACATCTTTGGAACTGTTGAGTTAG 1470 0.3599 MHDLIQEMGKQIVREESPKNPGQRSRLCDPKEVCDVLKNSRGTEIVEAIFFDASEYTNISLSPKAFEKMLSLQKSNVERLWNGETNLPNLEKIDLTGSNKLIECPNMADLGGNKIPSSILNNKNVRIFYFPMIECLVDLPENFANHIYLGSPLNPENDSFITLHKVLSSPAFVSLKHLCLTDNPTLSEIPDNIFLLSSLESLILMDMAITSLPENIKYLPQLNQLNVLNCKKLQSIPALSQFIPFFIVLNCESLEKVLSSMCEACDKPNPCFSVLINCKKLDLHSYQTVLEDAIDGIEQRARLNSANEDDIIGYLLPDMPGREYWFHYHSTQVSFTIELPPNLLGFAYYFVLSQGHMKKSVNFGCECYLEYSSAERIYITSFTRSNSFIYDLSYSPLLHLMSDHVVLWYDPVSCQKIMEEIKAIKELNSTSYSPKLTFRFFIDEALHDGIGIKECGFRWIYQEEAAFQPFLNPKKKKRRRRRTSLELLS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00605 489 Gene3D Ribonuclease Inhibitor 37 307 IPR032675 -
Trre16g00605 489 Pfam C-JID domain 325 465 IPR045344 -
Trre16g00605 489 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 253 IPR044974 GO:0006952
Trre16g00605 489 SUPERFAMILY L domain-like 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00605 Trre-Chr16 4509707 4512103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00605 1 73 WRKY Transcription Factor Family AT4G12020 39.726 1.01e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00605 - - psat:127076381 460.299