Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00597 ATGCAAAAGTGGAAGGATGCTCTGTTTGAAGCAGCCAACTTATCTGACTTCCATTTTAACAAAGGCAGGACTGAACCTGAATTGATTGAAGACATTGTGAAAGAAGTCTTGGGAAAACTAAATCACAAGTATACCAATGAACTTAGATTTCATTTCATACCAGATGAAAACTATTCCCAAGCTGAATCTTCCATAAACATCAATTCAAGAGAAGTTAGAATCATTGGACTGTGGGGTATGGGAGGCATATGCAAGACATCTCTTGCTGCTGCTCTCTTTCACAAGGTATCTTCCCAATATAAAGGTAGAAAATGTGGCGGAAGAATCTCAAAGGCATGGACTTCATTATATATACAACAGACTTCTTTCTACATTATTAAGGGAAGACATCCGTATTGA 399 0.3759 MQKWKDALFEAANLSDFHFNKGRTEPELIEDIVKEVLGKLNHKYTNELRFHFIPDENYSQAESSININSREVRIIGLWGMGGICKTSLAAALFHKVSSQYKGRKCGGRISKAWTSLYIQQTSFYIIKGRHPY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00597 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 103 IPR027417 -
Trre16g00597 132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 105 IPR044974 GO:0006952
Trre16g00597 132 Gene3D - 1 43 IPR035897 -
Trre16g00597 132 Gene3D - 44 120 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00597 Trre-Chr16 4465318 4466036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00597 2 101 WRKY Transcription Factor Family AT4G12020 33.663 1.87e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00597 - - gmx:100805490 149.828