Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00595 ATGGGACTGATGATAATTTTTCTACTATTTAAGCTACATTTTGTTCTCAGTAATCAACAGCTTCATGAATTTTCAGATACCAATCTACCCCATTTCAGAACCAGAAGTCATTTAAGTATTGCAATCCCACCGTCAGTGTCATCTTCTTATGCTCCTTCAAGTATTGAACAACCACCAACCAAGTCATCGTCAAGCGTTCCTACAAGTATTGCTCTACCACCTTCCAAGTCACATGATAGAGCTCCTACAAAGATATGGAAACATGGTTTTGAGGATTCTCCAATATCACATCATAAGCATCACTATTCCAGAAGAAAGAACCGCAATCCAACTCCAGTGCCGACCACCCCAATCCAGGCTCCTACATACAACAGTCAAGGTCCTTCTGTTTTCAAAGCACAACCTCCTTTCTCTTCACCAAAGTTCAAGTTTATCCATGGACCTGCGCCTGCACCATCACCAGCATTTCGGTCAAGCCATCTGGAGGTGCCGTCTCTTTCACCTAGAATTTCACCTCTAGGTTCATCGTTGGACAAGATTAAGACTCCACCACCGGCATATGCATTGGTTCTTCCCCCTCCACCTCCTAATAAAGATTGCTTGTCCGTTACCTGCTTAGAGCCGTTGACATACACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAAATCCGTGTCAGCATTTCAATATACAAGTGTTTTCCTCTGGTATCAAAGCTAGCTAAGGAAATTGCAGCAAGTGCTTTGCTGAACCAAACCCAAGTTCGTATTGTGGGAGCCGATGCAGCTAATCAGCAACTAGAGAAAACCAATATTCTCATAAACTTGGTACCTAAAGGAGTTAAATTTGATGATACCACAGCATTTTTAATATACAAAAAATTCTGGCACAGGGAGATTCTAATAGATGATTCCCTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCAAGGTCTTCCGCCATCTCCACCTTCAATCCCCTCAGGTATTTCTAGTATAGATGATGGGCCAAATCCAGGTCGTGATAACAACGGAATGATGATGAAACCTTTAGGAGTAGCTGTACCAAAGAAAGAAAAAGAAGGGAGCAACGGAAGAATGATTTTTATAATTGTAATGTCATCAATTACTGCTTTTGTTCTATTTCTTGGACTGGCTTGGCTTTGTCTGTTGAAATACAGCTGTTGTATTCATCAACATGAACAAGTTTCAGATAGCTTAAAGTCACCGTCTGCAAAACCTTTAAGGGTTGCTGGGCCATTGAATAATGGGTTTGTGCCAGGATCTGGACCGCGATCCTTCGACTCTGGAACAATAGCATATATAGGGTCTGCCAAGAATTTTACCTTGAATGACTTAGAGAAAGCAACAAATAACTTTGACTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGACTTGTTTACAAAGGTATTCTCAATGATGGGAGGGATGTAGCAGTGAAGATTCTCAAAAGAGATGATCGGCGTGGTGGCCGTGAATTCTTGGCAGAAGTTGAAATGCTTAGCCGCTTGCACCATAGAAACTTAGTTAAATTGATAGGTATATGCATAGAGAAACAAACTCGCTGCCTAGTGTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTGCATGGTGCTGACAAGGAAAGTGATCCATTGGATTGGAATTCCCGGATGAAGATTGCTCTTGGTGCAGCTCGAGGATTGGCTTATTTGCATGAAGATTCCAATCCATATGTCATACACCGGGACTTCAAGTCCAGTAACATCTTGTTGGAATATGATTTTACAGCCAAGGTTTCAGATTTTGGATTGGCTAGAACAGCACTGGAAGAGGGAAACAAACACATCTCCACACATGTCATGGGTACATTCGGCTACTTAGCTCCTGAATATGCAATGACTGGTCATCTTCTCGTCAAAAGTGATGTTTATAGTTACGGAGTTGTACTCCTTGAGCTTCTTACTGGTAGAAAGCCTGTGGATTTGTCACAACCGCCAGGTCAAGAAAATCTTGTCACATGGGTCCGTCCACTTCTCACGAGTAACGAAAGTTTGCAGACGATCATTGATCCAGTTGTAAAGCCTAGCATATCCATTGATACTGTGGTAAAAGTCGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTATCTCAACGACCTTTCATGGGAGAAGTTGTTCAAGCCTTGCAGCTTGTATGCAGTGAGTTTGAGGAAACAAAATATATAGAACCTAGTAACTTTCAAGAAGAGGGTCTTGTGAATAATGTGGAAGGCAAGTTTTTGGAGGTTTCGGGTGAGAGGGAGGAGTTTTCAGAGTATCAAAAAACACTTTATGGCTATCAATCTGGCGAAGAAAAGGTAAGATTATCAGCTTCAGAACTACTAAGTACTTCTGGCCAAGAATTTGAGTCATTCAGGAGGAAATCTACTTCAGGGCCTATTACCACCGAGAAGAAAAGACACTTCTGGCAAAATTTGAGAGGTTTGTCTAAAGGCAGCGCCAGCGAACATGGATTTTCGACTAAACTATGGCATGGATCCCGTTAA 2574 0.4196 MGLMIIFLLFKLHFVLSNQQLHEFSDTNLPHFRTRSHLSIAIPPSVSSSYAPSSIEQPPTKSSSSVPTSIALPPSKSHDRAPTKIWKHGFEDSPISHHKHHYSRRKNRNPTPVPTTPIQAPTYNSQGPSVFKAQPPFSSPKFKFIHGPAPAPSPAFRSSHLEVPSLSPRISPLGSSLDKIKTPPPAYALVLPPPPPNKDCLSVTCLEPLTYTPPGSPCGCVWPLQVKIRVSISIYKCFPLVSKLAKEIAASALLNQTQVRIVGADAANQQLEKTNILINLVPKGVKFDDTTAFLIYKKFWHREILIDDSLFGAYEVLYVHYQGLPPSPPSIPSGISSIDDGPNPGRDNNGMMMKPLGVAVPKKEKEGSNGRMIFIIVMSSITAFVLFLGLAWLCLLKYSCCIHQHEQVSDSLKSPSAKPLRVAGPLNNGFVPGSGPRSFDSGTIAYIGSAKNFTLNDLEKATNNFDSSRILGEGGFGLVYKGILNDGRDVAVKILKRDDRRGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHGADKESDPLDWNSRMKIALGAARGLAYLHEDSNPYVIHRDFKSSNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSNESLQTIIDPVVKPSISIDTVVKVAAIASMCVQPEVSQRPFMGEVVQALQLVCSEFEETKYIEPSNFQEEGLVNNVEGKFLEVSGEREEFSEYQKTLYGYQSGEEKVRLSASELLSTSGQEFESFRRKSTSGPITTEKKRHFWQNLRGLSKGSASEHGFSTKLWHGSR 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00595 857 MobiDBLite consensus disorder prediction 48 113 - -
Trre16g00595 857 FunFam receptor-like serine/threonine-protein kinase ALE2 438 540 - -
Trre16g00595 857 MobiDBLite consensus disorder prediction 80 98 - -
Trre16g00595 857 FunFam Receptor-like serine/threonine-protein kinase ALE2 541 755 - -
Trre16g00595 857 PANTHER OS01G0750732 PROTEIN 192 754 - -
Trre16g00595 857 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Trre16g00595 857 MobiDBLite consensus disorder prediction 48 72 - -
Trre16g00595 857 SUPERFAMILY Protein kinase-like (PK-like) 446 739 IPR011009 -
Trre16g00595 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Trre16g00595 857 CDD STKc_IRAK 471 739 - -
Trre16g00595 857 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00595 857 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Trre16g00595 857 Gene3D Transferase(Phosphotransferase) domain 1 541 761 - -
Trre16g00595 857 Gene3D Phosphorylase Kinase; domain 1 439 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00595 Trre-Chr16 4440828 4445320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00595 197 857 Receptor kinase-like Gene Family AT5G56890 56.195 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre16g00595 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00595 - - gmx:100814040 1298.11