Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00498 ATGATTAGAATGTCACTGCATTTTCTTTCAGCATTGCTTGGTGTCCTTACTGTTCTGGTTTTGATACAAGCTCAGGATGATCAATCAGGATTCATTAGTTTGGATTGTGGTCAACCTGAAGATGTGAGCTATTCTGCATTGAAGACAGGCATAAATTACATTTCAGATGCAAACTTTATAGATACCGGTGTAAGTAAAAGGTTAGGCAATTCTGAAAAGCTTAGTGAAGAGCTACTAGAATATGTGAGGAGCTTTCCTAATGGAGTAAGAAATTGTTACAAAATAAATATAACAAGTGGTACTAAATATTTAATCAGAACTACTTTCTATTATGGTAACTATGATAATCAAAATAAGCCACCACAATTTGATCTTCATATTGGAGCTAATGTGTGGGATACAGTGAAGTTCACCAATTTATCATACATTAAAACCAGTGAGATAATTTACACTCCATCACTAGATTACATACAGCTATGTCTTGTTAATACCGGCAAAGGGACACCATTCATTTCAGCTATAGAATTGAGAACTTTAAACAATGATACTTATGTCACACACTCAGCTAAATCAGTATTATTAGAATTCTTACGATTGGGTATAGGTTCCAATTCCATCACAAGCTTAGAATACAGGTACAAAGACGATGTATATGATCGCCTCTGGTTTACTTTTCAACCAGATGATATGAAACAATTAAGTGCATCACTTAACGGTGATGGTCTATTACTTCAGAGTGATTATAAACCACCAGCAATTGTGATGAGTACTGCCGCTACACCAGAAAATGTTAGTGCCCCTTTAGAATTAGAATGGGATGCAGATAATGTAAATGACCAATACTACCTCTATCTGCACTTTAATGAAGTTGAAGAGTTAGCAGCAAATGAAACCAGAGCATTCAATGTCACAGTGAATGGAGAGTTTTTTTATGGACCTATGACACCGAGATACCGGTCAGCAGATACCATGTTTAGTACAACACCTTTGACCCGAGCCGCAAGGTATCAAGTTTCCCTTTTTAAGACAGGAAATTCAACACTTCCACCCATCCTCAATGCCATTGAGATTTATAAAGTAAAAGACTTCTCACAATCAGAAACTCAACAGGATGATGTTTCTGCTATCACAAACATCAAGAATGCTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTAAAGTATATGTGGGAAGGCCTAAACTGTAGTATTGATGATGGAAGTAACCCCCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGTTTGACAGGGAAGATAGAATCTTCAATATCAAAGCTTACCATGTTACAGTACTTGGATTTATCAAACAATAGCTTAACTGGTCCCCTACCTGATTTTCTGTTACAACTGCATTCACTAAAAGTCTTAAACGTGAAGAAGAACAAACTTACAGGGTTAGTTCCAAGTGAACTCCTTGAGAGATCAAAAACTGGTTTACTATCACTCAGCGTGGATGATAATGATAATTCCGGTCTTTGTAAGACGAAATCCTGCAGAAAGAAGAGTTTGCCTGTAGCACTGATTGCATCGATTTCAGCATTAGTTGTTGTAATCCTCTTGATTTCTCTTGGATTTTGGATATTCAGAAGACATAAAGTTACGTCTAGAAATTCTAGGAAAAGGGTTTCACTGATATCAAAACAGCAGACATTCAATTACACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGTGGATTTGGAAAAGTTTACTTAGGCACACTACAAGATCAAACTCAAGTCGCTGTTAAGAGGCTTTCACCATCATCAGTGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATATTGTGATGAAGATGAAATCAAAGCATTAATCTATGAATACATGGCCAATGGAAATCTCCACCAACACTTGTTAGTGGAAAATACAAATACCTTAAAATGGAATGAGAGACTTAACATTGCAGTTGATTCTGCAAATGGATTGGATTATCTGCACAATGGATGTAAACCACCTATTATTCATAGAGATTTGAAACCTTCTAACATATTACTAGATGAAAGCATGCATGCTAAGATTGCTGATTTTGGTATAAGTAGAGCTTTTGGTAATGATATTGATTCTCATATATCCACCTGTCTGTAG 2205 0.3615 MIRMSLHFLSALLGVLTVLVLIQAQDDQSGFISLDCGQPEDVSYSALKTGINYISDANFIDTGVSKRLGNSEKLSEELLEYVRSFPNGVRNCYKINITSGTKYLIRTTFYYGNYDNQNKPPQFDLHIGANVWDTVKFTNLSYIKTSEIIYTPSLDYIQLCLVNTGKGTPFISAIELRTLNNDTYVTHSAKSVLLEFLRLGIGSNSITSLEYRYKDDVYDRLWFTFQPDDMKQLSASLNGDGLLLQSDYKPPAIVMSTAATPENVSAPLELEWDADNVNDQYYLYLHFNEVEELAANETRAFNVTVNGEFFYGPMTPRYRSADTMFSTTPLTRAARYQVSLFKTGNSTLPPILNAIEIYKVKDFSQSETQQDDVSAITNIKNAYGVARNWQGDPCGPVKYMWEGLNCSIDDGSNPPRITSLNLSSSGLTGKIESSISKLTMLQYLDLSNNSLTGPLPDFLLQLHSLKVLNVKKNKLTGLVPSELLERSKTGLLSLSVDDNDNSGLCKTKSCRKKSLPVALIASISALVVVILLISLGFWIFRRHKVTSRNSRKRVSLISKQQTFNYTEILNITDNFKTIIGEGGFGKVYLGTLQDQTQVAVKRLSPSSVQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDEIKALIYEYMANGNLHQHLLVENTNTLKWNERLNIAVDSANGLDYLHNGCKPPIIHRDLKPSNILLDESMHAKIADFGISRAFGNDIDSHISTCL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00498 734 Gene3D Transferase(Phosphotransferase) domain 1 649 734 - -
Trre16g00498 734 SUPERFAMILY Protein kinase-like (PK-like) 552 729 IPR011009 -
Trre16g00498 734 SMART serkin_6 573 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00498 734 FunFam Os07g0541700 protein 649 733 - -
Trre16g00498 734 Pfam Malectin-like domain 34 360 IPR024788 -
Trre16g00498 734 Pfam Protein tyrosine and serine/threonine kinase 575 724 IPR001245 GO:0004672|GO:0006468
Trre16g00498 734 FunFam Leucine-rich repeat receptor-like protein kinase 550 648 - -
Trre16g00498 734 PANTHER OS07G0107800 PROTEIN-RELATED 32 732 - -
Trre16g00498 734 SUPERFAMILY L domain-like 377 515 - -
Trre16g00498 734 Gene3D Ribonuclease Inhibitor 373 494 IPR032675 -
Trre16g00498 734 ProSiteProfiles Protein kinase domain profile. 573 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00498 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Trre16g00498 734 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Trre16g00498 734 FunFam Leucine-rich repeat receptor-like kinase 371 504 - -
Trre16g00498 734 Gene3D Phosphorylase Kinase; domain 1 545 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00498 Trre-Chr16 3665266 3669568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00498 4 734 Receptor kinase-like Gene Family AT2G19210 45.455 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre16g00498 Malectin_like 2.3e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00498 - - mtr:25500366 963.755