Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00497 ATGATTAGAATGTCACTGCATTTTCTTTCAGCATTGCTTGGTGTCCTTACTGTTCTGGTTTTGATACAAGCTCAGGATGATCAATCAGGATTCATTAGTTTGGATTGTGGTCAACCTGAAGATGTGAGCTATTCTGCATTGAAGACAGGCATAAATTACATTTCAGATGCAAACTTTATAGATACCGGTGTAAGTAAAAGGTTAGGCAATTCTGAAAAGCTTAGTGAAGAGCTACTAGAATATGTGAGGAGCTTTCCTAATGGACCACCACAATTTGATCTTCATATTGGAGCTAATGTGTGGGATACAGTGAAGTTCACCAATTTATCATACATTAAAACCAGTGAGATAATTTACACTCCATCACTAGATTACATACAGCTATGTCTTGTTAATACCGGCAAAGGGACACCATTCATTTCAGCTATAGAATTGAGAACTTTAAACAATGATACTTATGTCACACACTCAGCTAAATCAGTATTATTAGAATTCTTACGATTGGGTATAGGTTCCAATTCCATCACAAGCTTAGAATACAGGTACAAAGACGATGTATATGATCGCCTCTGGTTTACTTTTCAACCAGATGATATGAAACAATTAAGTGCATCACTTAACGGTGATGGTCTATTACTTCAGAGTGATTATAAACCACCAGCAATTGTGATGAGTACTGCCGCTACACCAGAAAATGTTAGTGCCCCTTTAGAATTAGAATGGGATGCAGATAATGTAAATGACCAATACTACCTCTATCTGCACTTTAATGAAGTTGAAGAGTTAGCAGCAAATGAAACCAGAGCATTCAATGTCACAGTGAATGGAGAGTTTTTTTATGGACCTATGACACCGAGATACCGGTCAGCAGATACCATGTTTAGTACAACACCTTTGACCCGAGCCGCAAGGTATCAAGTTTCCCTTTTTAAGACAGGAAATTCAACACTTCCACCCATCCTCAATGCCATTGAGATTTATAAAGTAAAAGACTTCTCACAATCAGAAACTCAACAGGATGATGTTTCTGCTATCACAAACATCAAGAATGCTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTAAAGTATATGTGGGAAGGCCTAAACTGTAGTATTGATGATGGAAGTAACCCCCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGTTTGACAGGGAAGATAGAATCTTCAATATCAAAGCTTACCATGTTACAGTACTTGGATTTATCAAACAATAGCTTAACTGGTCCCCTACCTGATTTTCTGTTACAACTGCATTCACTAAAAGTCTTAAACGTGAAGAAGAACAAACTTACAGGGTTAGTTCCAAGTGAACTCCTTGAGAGATCAAAAACTGGTTTACTATCACTCAGCGTGGATGATAATGATAATTCCGGTCTTTGTAAGACGAAATCCTGCAGAAAGAAGAGTTTGCCTGTAGCACTGATTGCATCGATTTCAGCATTAGTTGTTGTAATCCTCTTGATTTCTCTTGGATTTTGGATATTCAGAAGACATAAAGTTACGTCTAGAAATTCTAGGAAAAGGGTTTCACTGATATCAAAACAGCAGACATTCAATTACACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGTGGATTTGGAAAAGTTTACTTAGGCACACTACAAGATCAAACTCAAGTCGCTGTTAAGAGGCTTTCACCATCATCAGTGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATATTGTGATGAAGATGAAATCAAAGCATTAATCTATGAATACATGGCCAATGGAAATCTCCACCAACACTTGTTAGTGGAAAATACAAATACCTTAAAATGGAATGAGAGACTTAACATTGCAGTTGATTCTGCAAATGGATTGGATTATCTGCACAATGGATGTAAACCACCTATTATTCATAGAGATTTGAAACCTTCTAACATATTACTAGATGAAAGCATGCATGCTAAGATTGCTGATTTTGGTATAAGTAGAGCTTTTGGTAATGATATTGATTCTCATATATCCACCTGTCTGTAG 2112 0.3679 MIRMSLHFLSALLGVLTVLVLIQAQDDQSGFISLDCGQPEDVSYSALKTGINYISDANFIDTGVSKRLGNSEKLSEELLEYVRSFPNGPPQFDLHIGANVWDTVKFTNLSYIKTSEIIYTPSLDYIQLCLVNTGKGTPFISAIELRTLNNDTYVTHSAKSVLLEFLRLGIGSNSITSLEYRYKDDVYDRLWFTFQPDDMKQLSASLNGDGLLLQSDYKPPAIVMSTAATPENVSAPLELEWDADNVNDQYYLYLHFNEVEELAANETRAFNVTVNGEFFYGPMTPRYRSADTMFSTTPLTRAARYQVSLFKTGNSTLPPILNAIEIYKVKDFSQSETQQDDVSAITNIKNAYGVARNWQGDPCGPVKYMWEGLNCSIDDGSNPPRITSLNLSSSGLTGKIESSISKLTMLQYLDLSNNSLTGPLPDFLLQLHSLKVLNVKKNKLTGLVPSELLERSKTGLLSLSVDDNDNSGLCKTKSCRKKSLPVALIASISALVVVILLISLGFWIFRRHKVTSRNSRKRVSLISKQQTFNYTEILNITDNFKTIIGEGGFGKVYLGTLQDQTQVAVKRLSPSSVQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDEIKALIYEYMANGNLHQHLLVENTNTLKWNERLNIAVDSANGLDYLHNGCKPPIIHRDLKPSNILLDESMHAKIADFGISRAFGNDIDSHISTCL 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00497 703 ProSiteProfiles Protein kinase domain profile. 542 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00497 703 ProSitePatterns Protein kinases ATP-binding region signature. 548 570 IPR017441 GO:0005524
Trre16g00497 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Trre16g00497 703 Pfam Protein tyrosine and serine/threonine kinase 544 693 IPR001245 GO:0004672|GO:0006468
Trre16g00497 703 Gene3D Phosphorylase Kinase; domain 1 514 617 - -
Trre16g00497 703 FunFam Os07g0541700 protein 618 702 - -
Trre16g00497 703 Pfam Malectin-like domain 89 329 IPR024788 -
Trre16g00497 703 Pfam Malectin-like domain 34 88 IPR024788 -
Trre16g00497 703 FunFam Leucine-rich repeat receptor-like protein kinase 519 617 - -
Trre16g00497 703 SUPERFAMILY L domain-like 346 484 - -
Trre16g00497 703 SMART serkin_6 542 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g00497 703 Gene3D Ribonuclease Inhibitor 342 463 IPR032675 -
Trre16g00497 703 PANTHER OS07G0107800 PROTEIN-RELATED 32 701 - -
Trre16g00497 703 Gene3D Transferase(Phosphotransferase) domain 1 618 703 - -
Trre16g00497 703 FunFam Leucine-rich repeat receptor-like kinase 340 473 - -
Trre16g00497 703 SUPERFAMILY Protein kinase-like (PK-like) 521 698 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00497 Trre-Chr16 3665266 3669568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00497 4 703 Receptor kinase-like Gene Family AT2G19210 43.182 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre16g00497 Malectin_like 1.3e-71 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00497 - - mtr:25500366 890.567