Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00444 ATGAGTTCAGGTGGTGCATTTGGTGGCAACAGGGGACTCCGTCCGGTGCCTCCCGAAAAGGGAATTTTCCCATTGGATCATATGCATTTGTGTGACCTGGACAAGAAAGAATATCTCAACTGTCTAAAGACTGCTGGAAACAAGTCTGAAATATGTAGGGAATTCTCAAAAAAATATCTGCAATGCCGTATGGAAAAGAACTTGATGGCAAAGCAAGATTTGGCAGAACTTGGTTTTAAAGAAGTGCTCTATTTTTCCTTGTTTCTGAGCTTAATCATTTTAATTTGGGGAAGAGCTAAGCTATGTTTCAAGGATGGAAGAGTGGTGATGCACCTCAAAATTCAAGGATTGAACCTAACCGGATATCTTGGAACCTCGCAGTATTATCTACAAAATTTGAAGATAATTGATGTCAATTCCAACTGCATAATGAGTGAAATACTGATTTTGTTCCTGCATGGTAAATTTAAGTTTGGTCCTGTTCGCCCTCCAAGGAACACTTCTGCATCTTCTACTGCAGTGCTGTATTTTGACAAGACTGACTTTCGAAGGCTTCAAAATGGCAGGACCGTTTATTTAAAAACTGTAGTGAAATTGAATACTTTGATACATGAGAAGTTGTTAGATGAATGCTTTCTTGGAAACAACATAGGATTACGCTGTGAGCTAGAGATTAGTATAATAAATGAGTTTAGGATGAGATATGGGAATGATAGTTCAGTTGATTATTTAGAAAAAGTAGTTAACATTGGAGAGGAAACAGTTGCAGCAATGAGAACAGTAGATGATATTCATGATCTTTTCATTGTTGGAAGAGGTCAAGGAATGATATCACCATCGACAGCAGGACTCACTGATTTGGAGTGA 867 0.3818 MSSGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLDKKEYLNCLKTAGNKSEICREFSKKYLQCRMEKNLMAKQDLAELGFKEVLYFSLFLSLIILIWGRAKLCFKDGRVVMHLKIQGLNLTGYLGTSQYYLQNLKIIDVNSNCIMSEILILFLHGKFKFGPVRPPRNTSASSTAVLYFDKTDFRRLQNGRTVYLKTVVKLNTLIHEKLLDECFLGNNIGLRCELEISIINEFRMRYGNDSSVDYLEKVVNIGEETVAAMRTVDDIHDLFIVGRGQGMISPSTAGLTDLE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00444 288 PANTHER CYTOCHROME C OXIDASE 19-1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00444 Trre-Chr16 3268283 3273119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00444 222 286 Antiporter Super Family AT2G13620 58.462 5.63e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00444 K18183 - tpra:123885559 172.94