Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00443 ATGACTTCTCTTTACCAGTGGTTCTATTATTTCACAAGTGTTCACTTTATTTTCACATTGGCTCGTGCTGATAACTATATCATTCATATGAATTTATCAGCTATGCCAAAAGCATTCTTAAACCAACATAGTTGGTATGAATCTGCTCTTTCTCAAGTTACTCCTATCAACAATAATTTCAAGTCTACCTCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCAAATCTATCACCCGAAGAGCATGAAGCTCTCAAAACCTCCCCTAGTTACATTTCATCAATACCAGATTTACCCTTGAAGCTTCATACAACACACTCACCTCAATTCCTTGGTCTTAATCCCTACAAAGGAGCATGGCCAGCCTCTCATTTTGGCAAAGATGTCATTGTTGGTGTAATTGACACGGGTGTTTGGCCAGAAAGTGAAAGTTTCACTGATAAGGGAATGGCTAAAATTCCTTCAAAATGGAAAGGCCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTGTGTAACAAAAAACTCATTGGAGCCAGGTACTTTAATAAAGGATTCTTGGCGAAATATTCAAACATTAGTAGAACAATTGTGAACACGACACGTGACATAAACGGTCATGGGACCCACACTTCATCAATAGCAGCCGGAAGTAGAGTAGATAATGCATCTTTTGTTGGTTTAGCAAATGGAACAGCAACAGGTATAGCTCCATCGTCTAGACTAGCTATTTACAAGGTTGTGTGGGGAACAGATGAAATTGCATCTGATGTAATGGCTGGAATTGATGCCGCAATATCAGACGGTGTTGATGTTCTTTCAATGTCATTAGGCTATAACAAGAATGTGCCTTTGTATGAAGATGCTATTGCTATAGCAACATTTGCAGCTATGGAAAAAGGTATTTTTGTGTCTGCTTCAGCCGGTAATGAAGGACCTTCCTTTAATACTATAAGCAATGGAATACCATGGGTGACAACTGTTGCTGCTAGTACTTTAGATCGCGAATTTCATGGAAATCTTACACTTGATAATGGAGTGTCACTCACTGGCTTCACTTTTTATCTGGGTAAATTCTCCGCTAGTAATTTTCCAATTGTTTTTATGGGTATGTGTGACAACATTAAAGAACTAATCAAAGTGAAGAGCAAAATTGTGGTTTGTGAAGATAAGAATGGAACTTTTCTTAATTTTGTTAATCTAATTAATAATGTGGGTGGATCAAAAGTAGTTGGAAGTGTTATCATAACAAACATATCAAATACCGATGAATTTAAATTCTCATATGCGCTCCCGTCCATCATTATTAACCCAAAAGATGGAGAAATTGTCAAAGATTTCATCAAGAGAACTTCTGGTAGTGGTTCAATTGCAAAAATATCTTTCAAGATAACATCTTTTGGTACTAAACCAGCGCCTAGTGTGGATTTTTATAGTTCAAGAGGACCTTCAAAGAATTGTCCATATGTTTTGAAACCTGACATTACAGGTCCTGGTACATCAATCTTAGCAGCATGGCCCACAAATATTCCTGCGGTGGATTTTAACTCTTATAATTTTGGATATTATAAACTCTTCAACAAGTTCAATTTTTTAACCGGAACATCTATGTCATGTCCTCATGTTGCTGGTGTCGCAGCACTTTTAAAAAGTGTGCACGGTGATTGGAGCCCTGCGGCGATTCGGTCGGCAATAATGACAACATCAGACATATTTGATAATACTAAGGAACACATCAAAGACATTGGAACAGGTAACAAAGCAACACCTCTTGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAAACATCACTGCCATTACAAGATCATCCGTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTATCCTTCTTTTATTGCTTTTTTCAATGTTGGAAATTCTTCAAAGACAACACAACATTTTCATAGAACAGTTACCAATGTTGGTGAAGGACAAACAACTTATGTTGCTAATGTTACACCAATTAAAAGGTTTCGTATCAGCGTTATTCCAAAGAAGTTGGTATTCAAGAAGAAGAACCAGAAGATAAGCTATAGGTTGAGCATTGAAGGTCCAAAAATGATACAAAAGAATAAAGTATCTTTTGGATATCTTACTTGGAAGGATGAGAAGCATGTAGTCAGGAGTCCTATTGTTGTAACCACCCCCGGTTTCAATTTGTAG 2289 0.3657 MTSLYQWFYYFTSVHFIFTLARADNYIIHMNLSAMPKAFLNQHSWYESALSQVTPINNNFKSTSSKIIYTYNNVMNGFSANLSPEEHEALKTSPSYISSIPDLPLKLHTTHSPQFLGLNPYKGAWPASHFGKDVIVGVIDTGVWPESESFTDKGMAKIPSKWKGQLCQFENTNNSSLCNKKLIGARYFNKGFLAKYSNISRTIVNTTRDINGHGTHTSSIAAGSRVDNASFVGLANGTATGIAPSSRLAIYKVVWGTDEIASDVMAGIDAAISDGVDVLSMSLGYNKNVPLYEDAIAIATFAAMEKGIFVSASAGNEGPSFNTISNGIPWVTTVAASTLDREFHGNLTLDNGVSLTGFTFYLGKFSASNFPIVFMGMCDNIKELIKVKSKIVVCEDKNGTFLNFVNLINNVGGSKVVGSVIITNISNTDEFKFSYALPSIIINPKDGEIVKDFIKRTSGSGSIAKISFKITSFGTKPAPSVDFYSSRGPSKNCPYVLKPDITGPGTSILAAWPTNIPAVDFNSYNFGYYKLFNKFNFLTGTSMSCPHVAGVAALLKSVHGDWSPAAIRSAIMTTSDIFDNTKEHIKDIGTGNKATPLALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALNFTQKNITAITRSSVNDCSKPSLDLNYPSFIAFFNVGNSSKTTQHFHRTVTNVGEGQTTYVANVTPIKRFRISVIPKKLVFKKKNQKISYRLSIEGPKMIQKNKVSFGYLTWKDEKHVVRSPIVVTTPGFNL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00443 762 Gene3D Peptidase S8/S53 domain 133 623 IPR036852 GO:0004252|GO:0006508
Trre16g00443 762 Gene3D - 340 474 - -
Trre16g00443 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 755 IPR045051 -
Trre16g00443 762 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Trre16g00443 762 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Trre16g00443 762 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Trre16g00443 762 Pfam Subtilase family 131 581 IPR000209 GO:0006508|GO:0008236
Trre16g00443 762 Gene3D - 627 758 - -
Trre16g00443 762 FunFam Subtilisin-like protease SBT1.5 133 349 - -
Trre16g00443 762 Pfam Peptidase inhibitor I9 26 108 IPR010259 -
Trre16g00443 762 FunFam Subtilisin-like protease SBT1.9 15 108 - -
Trre16g00443 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Trre16g00443 762 Pfam Fibronectin type-III domain 654 755 IPR041469 -
Trre16g00443 762 CDD PA_subtilisin_like 346 466 - -
Trre16g00443 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 108 IPR037045 -
Trre16g00443 762 ProSiteProfiles Serine proteases, subtilase domain profile. 104 610 - -
Trre16g00443 762 CDD Peptidases_S8_3 105 576 IPR034197 -
Trre16g00443 762 SUPERFAMILY Subtilisin-like 107 614 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00443 Trre-Chr16 3265633 3267921 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00443 8 745 Subtilisin-like Serine Gene Family AT5G67090 43.899 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00443 - - gmx:100786751 935.25