Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00441 ATGAATTTATCAGCTATGCCAAAAGCATTCTTAAACCAAACATATGCAAATCTATCACCCGAAGAGCTTGAAGCTCTCAAAACCTCCCCTGGTTACATTTCATCAATACCAGATTTACCCTTGAAGCTTCACACAACACACTCACCTCAATTCCTTGGTCTTAATCCCTACAAAGGAGCATGGCCAACCTCTAATTTTGGCAAAGATGTCATTGTTGGTGTGATTGACACTGGTATTTGGCCAGAAAGTGAAAGTTTCAATGATAAAGGAATGACTGAAATACCTTCAAAATGGAAAGGCCAGTTATGTCAGTTTGAAAATACCAACAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCTAGGTACTTTAATAAAGGATTCTTGGCAAAATATTCAAACCTTAGTAGAACAATTGTGAACACGACACGTGACATAAACGCAAATGGGACCCACGTTTCATCAATAGCAGCGGGAAGCATAGTAAATGGTGCATCTTTCTTTGGTTTAGCAAATGGAACAGCAATGGGGATAGCTTCATTGTCTCGACTAGCCATGTACAGGGTTGCGTGGGGAACGCCTGTAGTTACAAACACTTATGGTATTGCTATAGGATCATTTGCAGCTATGGAAAAAGGTATTTTTGTGTCTACTTCAGCAGGTAATGGTGGACCTTCCGTTAGAACTATAACCAATGAAATGCCGTGGGTGACAACTGTTGCTGCTGGTACTTTAGATCGCAAATTTCATGGAAATATTACACTTGGTAATGGAATCTCACTCACTGGCATCGCTTGTTATCATGGTAAATTCCCCGCTACCAATTTTCCAATTGTTTTCATGGGTATGTGTGACAATGTTAAAGAACTAATCAAAGTGAAGAGCAAGATTGTGGTTTGTGAAGTTAAGAATGCAACCCTTGATAATCTTTTTAAACCAACTAGGAAATTGTATGAAGCAAAAGTTGTTGGAAGTGTTCTCATAACAAACACATTACAACAAGTTGATGAATTTATGTTTTTAAGTTTGCTCCCATTCCCAACTATCATTATTAACCAAAAAAATGGAGAAATTGTCAAAGATTTCATCAAGAGAACCTCTTACTCAAGTTCAATAGCAAAAATGTCTTTTAAGATAACATCTTTTGACGCTAAACCAGCGCCTAGTGTGGATTTTTATAGTTCAAGAGGGCCTTCCAAGAGTTGTCCATATGTTTTGAAACCCGATATTACAGGTCCTGGTACATCAATCTTAGCAGCATGGCCCACAAATGTCCGTGTGGCTGATTTTGTATCTTATAATAAGTTTAATATTTTAAGTGGAACATCTATGGCGTGCCCTCATATTGCTGGTGTCGCAGCGCTTTTAAAAGGCGCACATGGTGATTGGAGCCCTGCGGCTATTCGGTCGGCAATAATGACAACGTCCGACATATTTGATAATACTAAGGAACACATCAAAGACATTGGAACAGGTAACAAAGCAACACCTCTTGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTACACACAAAAACACATCACTGCCATTACAAGATCATCTTTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTATCCTTCTTTCATTGCTTTTTTCAATGCTGGAAATTCTTCAAAGACAACACAACATGTTGCTAATGTTACACCAATTAAGAGTTTTCGTATCAGCGTTATTCCAAATAAGTTGGTGTTCAAGAAGAAGAATGAGAAGATAAGCTACAGGTTGAGCATTGAAGGTCCAAGAATTATACAAAAGAATAAATTGTCTTTTGGATATCTTACTTGGAAGGATGAGAAGCATGTAGTCAGGAGTCCTATTGTTGTAACAACCCCTAATTTCAATTTGTAG 1947 0.3785 MNLSAMPKAFLNQTYANLSPEELEALKTSPGYISSIPDLPLKLHTTHSPQFLGLNPYKGAWPTSNFGKDVIVGVIDTGIWPESESFNDKGMTEIPSKWKGQLCQFENTNNSSLCNKKLIGARYFNKGFLAKYSNLSRTIVNTTRDINANGTHVSSIAAGSIVNGASFFGLANGTAMGIASLSRLAMYRVAWGTPVVTNTYGIAIGSFAAMEKGIFVSTSAGNGGPSVRTITNEMPWVTTVAAGTLDRKFHGNITLGNGISLTGIACYHGKFPATNFPIVFMGMCDNVKELIKVKSKIVVCEVKNATLDNLFKPTRKLYEAKVVGSVLITNTLQQVDEFMFLSLLPFPTIIINQKNGEIVKDFIKRTSYSSSIAKMSFKITSFDAKPAPSVDFYSSRGPSKSCPYVLKPDITGPGTSILAAWPTNVRVADFVSYNKFNILSGTSMACPHIAGVAALLKGAHGDWSPAAIRSAIMTTSDIFDNTKEHIKDIGTGNKATPLALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALNYTQKHITAITRSSFNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHVANVTPIKSFRISVIPNKLVFKKKNEKISYRLSIEGPRIIQKNKLSFGYLTWKDEKHVVRSPIVVTTPNFNL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00441 648 PRINTS Subtilisin serine protease family (S8) signature 67 86 IPR015500 -
Trre16g00441 648 PRINTS Subtilisin serine protease family (S8) signature 440 456 IPR015500 -
Trre16g00441 648 PRINTS Subtilisin serine protease family (S8) signature 145 158 IPR015500 -
Trre16g00441 648 SUPERFAMILY Subtilisin-like 43 515 IPR036852 GO:0004252|GO:0006508
Trre16g00441 648 ProSiteProfiles Serine proteases, subtilase domain profile. 40 511 - -
Trre16g00441 648 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 200 641 IPR045051 -
Trre16g00441 648 Gene3D Peptidase S8/S53 domain 69 193 IPR036852 GO:0004252|GO:0006508
Trre16g00441 648 Pfam Subtilase family 67 482 IPR000209 GO:0006508|GO:0008236
Trre16g00441 648 Gene3D Peptidase S8/S53 domain 199 524 IPR036852 GO:0004252|GO:0006508
Trre16g00441 648 CDD Peptidases_S8_3 41 477 IPR034197 -
Trre16g00441 648 Gene3D - 246 383 - -
Trre16g00441 648 ProSitePatterns Serine proteases, subtilase family, serine active site. 441 451 IPR023828 -
Trre16g00441 648 Pfam Fibronectin type-III domain 555 641 IPR041469 -
Trre16g00441 648 Gene3D - 528 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00441 Trre-Chr16 3250815 3253122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00441 16 631 Subtilisin-like Serine Gene Family AT5G67090 41.359 2.48e-162 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00441 - - gmx:100786751 765.763