Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g00440 ATGGCCAAGGATAGTTTTGTTTTATTATTCCTTGTGTTTTTAGTTTTGACATCAATTATTTTTTTGGTGTGTGAGGCCACTGAAAGTAACCATGAAAGTAGTAAAGTTCACATTGTATACATGGGCTCACTTCCTAAAGAAGCATCGTATTCTCCAATCTCTCATCATATTACCTTGTTGCAACAAGTTTTCGATGATAATGACATACAAAAATGCTTAGTTCGAAGTTACAAGAAGAGTTTCAATGGTTTTGCTGCTATACTCAATGATCAACAAAGGGAAAAACTTGCCGGCATGAAAGGTGTGGTTTCAGTTTTTCCAAGCCAAGAGTACCACCTTACAACCACGAGGTCGTGGGACTTCATTGGTTTACCTCAATCAATCAAACGACATCAAACTGTTGAAAGTGATTTAGTGATTGGAATCATAGATACTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATAAAGGTCTTGGTCCTATTCCAAGAAAATGGAACGGAGTTTGTGCAGGTGGTCGTAACTTTAGTTGCAACAAGAAGATAATCGGAGCACGATTCTACGGTCATGGAGAGGACAGTGCAAGAGACTATTTTGGTCATGGAACTCACACATCATCAATAGCAGGTGGAAGAGAGGTGAAAGGTGTGAGTTTTGATGGTCTTGCAAAAGGAACTATAAGAGGTGGAGTCCCATCTTCAAGGATTGCTACATATAAAGTTTGCAGTGGTCGTAGTTTATGCACTAGTGATGTTATTTTAGCTGCATTTGACGATGCCATTGCTGATGGAGTTGACGTCATCACTATCTCTATGGGTAGCTCAAAAGGCAATGAATTAGTGAACGATCCTATTGCCGTTGGTTCTTTTCATGCCATGAAGAAGGGAATACTCACAACGCATGCTGCAGGAAACAACGGTCCTAAACCAAGTAGTATTGCAAGTGTAGCACCTTGGCTATTTAGTGTTGCTGCAACTACAATCGATCGTCAATTCATTACTAAGCTCATTCTTGGAAATGGAAAGACTTTTATTGGTAAGTCAGTCTATACCGGCCCTTCAAATGGAACCAATTTTCCAATAGCTGTGCGTAATGGTAAAGGTTGCCCCAATGGAGGAAATATAGGCCTTAAAATGTGCGATTGTTTTGACAAAAGAATAGTGAAGGGTAAGCTTGTTTTGTGTGGATTATTTGGTGGAATAGATACTCCAAATACAGGTGTAATTGGTACAATACGAAATGTTACACACTCTACATTTGAACTTTCTCCTGTCACTTTTAAGCCTTCACTTAACTTGGAAACAAATGACTTTGTTCAAGTTAAATTTTACACAAATTTCACTAAATACCCTGTAGCTAAAATTTTAAAGAGTGAGATATTCCATGACACCAATTCTCCAAAAGTTGTCTATTTCTCTTCTCGTGGCCCAAATAATTTGGTTCCAGAAATTATGAAACCAGATGTAAGTGCTCCAGGAGTGAATATCTTGGCTGCATATTCACCTTTAGGGCTATCCTCAAGAGATGCAGATGACAAGAGAAAGTTAAAATACAACATATTGGAAGGAACCTCTATGGCATGTCCTCACGTTGCTGCAGTTGTTGCATATGTTAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACCGCAAAACCAGTGAAAGGTACTTATGATGATTTGGTAGGTGAATTTGCTTATGGTTCTAGGAATATCAATCTACAACAAACCATTTACCCAGGACTTGTTTATGACATCACTAAGGAAGATTATGTGCAAATGCTTTGTAATTATGGGTATGATGCAACCAAAATTAAACAAATTAGTGGAGATAATTCTAGTTGCCATATAACGTCTCAAAGATCCGTGTTGAAAGATATAAACTATCCTGCAATGGTGATTCCTGTTGTGTCTGATATTAAGCATTTCCAAGCCAAGATTCATAGAATAGTCACAAACGTTGGTTTTCCAAACTCAACCTATAAGGCTACTCTCATCCATCAAAATCCAAAAATCAAGATAAAAGTTCAACCAAAACTTCTCAAATTCAGATCATTACATGAGAAACAATCATTTGTTGTCACTATTATTGGAAGAGAAAAATTAAATCAAACTGTGTTTTCCTCATCACTCATTTGGTTTGATGGCACCCACAAAGTCAAAAGTCCCATTATTATCCAAATACTACCTCCATAG 2217 0.3771 MAKDSFVLLFLVFLVLTSIIFLVCEATESNHESSKVHIVYMGSLPKEASYSPISHHITLLQQVFDDNDIQKCLVRSYKKSFNGFAAILNDQQREKLAGMKGVVSVFPSQEYHLTTTRSWDFIGLPQSIKRHQTVESDLVIGIIDTGIWPESESFNDKGLGPIPRKWNGVCAGGRNFSCNKKIIGARFYGHGEDSARDYFGHGTHTSSIAGGREVKGVSFDGLAKGTIRGGVPSSRIATYKVCSGRSLCTSDVILAAFDDAIADGVDVITISMGSSKGNELVNDPIAVGSFHAMKKGILTTHAAGNNGPKPSSIASVAPWLFSVAATTIDRQFITKLILGNGKTFIGKSVYTGPSNGTNFPIAVRNGKGCPNGGNIGLKMCDCFDKRIVKGKLVLCGLFGGIDTPNTGVIGTIRNVTHSTFELSPVTFKPSLNLETNDFVQVKFYTNFTKYPVAKILKSEIFHDTNSPKVVYFSSRGPNNLVPEIMKPDVSAPGVNILAAYSPLGLSSRDADDKRKLKYNILEGTSMACPHVAAVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYDDLVGEFAYGSRNINLQQTIYPGLVYDITKEDYVQMLCNYGYDATKIKQISGDNSSCHITSQRSVLKDINYPAMVIPVVSDIKHFQAKIHRIVTNVGFPNSTYKATLIHQNPKIKIKVQPKLLKFRSLHEKQSFVVTIIGREKLNQTVFSSSLIWFDGTHKVKSPIIIQILPP 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g00440 738 Gene3D - 329 462 - -
Trre16g00440 738 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 732 IPR045051 -
Trre16g00440 738 Gene3D Peptidase S8/S53 domain 137 598 IPR036852 GO:0004252|GO:0006508
Trre16g00440 738 Pfam Subtilase family 136 561 IPR000209 GO:0006508|GO:0008236
Trre16g00440 738 Pfam Fibronectin type-III domain 633 733 IPR041469 -
Trre16g00440 738 ProSiteProfiles Serine proteases, subtilase domain profile. 118 585 - -
Trre16g00440 738 FunFam Subtilisin-like protease SBT5.3 25 114 - -
Trre16g00440 738 Gene3D - 602 736 - -
Trre16g00440 738 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Trre16g00440 738 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Trre16g00440 738 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Trre16g00440 738 CDD Peptidases_S8_3 111 558 IPR034197 -
Trre16g00440 738 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Trre16g00440 738 CDD PA_subtilisin_like 336 455 - -
Trre16g00440 738 SUPERFAMILY Subtilisin-like 116 568 IPR036852 GO:0004252|GO:0006508
Trre16g00440 738 Pfam Peptidase inhibitor I9 36 113 IPR010259 -
Trre16g00440 738 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g00440 Trre-Chr16 3243298 3245827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g00440 26 736 Subtilisin-like Serine Gene Family AT5G59100 47.928 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g00440 - - psat:127076787 897.116